Protein

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Genbank accession

YP_004300937.1 [GenBank]

Protein name

baseplate wedge subunit

RBP type

Evidence UniProt/TrEMBL

Probability 1,00

TSP

Evidence DepoScope

Probability 1,00

TSP

Evidence RBPdetect

Probability 0,91

Protein sequence

MSIQKPKELIDTGIRGQEGTGDTLFDGGEKLNADLNSMWNVFGDYRIGKTSGFGNRVQTLHGTGYYQKHTRAYYAGSEQPSGNPVDFGSMHDISVTRDGAGDITINLPAGSGHAGECIELVNTDGSVGFGTGREVIIKTTGTGDSIGSLGNRMVINRTNFRIRLWVTEGSPAGSKWNYKLDSMFGDSATSYAANILNIAAGAQRNVVLFNKAQYNVVKHMLFVTQRGASVHQESCETLLMVNNTSNTDTNVYSTEYARIRTRTPSKPEDNLLFDATYSITGSSVILTVTNISQTAIDVYVKSIDAIGGIITMKQQIIIGNRVDDGTGDYLRKGGQKTNDNFNELYYNLGDGNIPHAAGAWKPYSDHTKPLKAVMGQAWVINTTTGRITVELPLGTVADYGNVVRIRDVNGTWGSNPVLLIPAGFNTVKGGSGTHRLDKNRMDVELVYCSPGNWEYVSSKFVDDIKSGDVSTVAKREYIATEGQTDFSDIFPSGYNPAAVNVYKRGNILYYGADYGPESNYGSIVGVNPAPQSNIVVTPKKLDNTKYGYTKGVASSVLTGKVENIEITKFYIDDTKNLSYILFDLNKTPLNQNFLKVTFNGKDYIFKQSPSSKEYVSTGVVPEIVAAFKGTANVTLKVGVSKITALDGYTIRLDKPCEAGDVVIVETFLDGLATYRSSYETATIRVYSNKLTPIDYVSETGRRYVGDLSSKYRFTITEFGFQPNETFNPNTLELLVNGRQLVKSGSADIPFFICEGADAITEESCIGSGGVWVPSGVDYSPVPDSAGMMRDIVINDELEHEDVVTIRWFNNDIGSLLELDEILGETDERYIASSPVNITGKIMYSDPFRPGPTTVIPDPNDQIGVKVSTVSMLFDMFHPIGTIYENADNPNNPQSYMGMGVWVRYAEGMTVAGWNSQNMNDPLYGLNNNDLDLNGNPRHSAGGTIGSNEIVILAENTPGTKSTEKSLISDPDGDILVGGCQYDPDEEGPGYKKYREDYVLTRPSATVNPIQIVQPTITAHRWLRVEYDKYL

Physico‐chemical properties

protein length:	1030 AA
molecular weight:	112627,61960 Da
isoelectric point:	5,04568
aromaticity:	0,09320
hydropathy:	-0,33718

Domains

Domains [InterPro]

IPR036240
STR
1–306

IPR036240 IPR036240 IPR054430 IPR053827

IPR008987
ATT
7–184

IPR008987 IPR027412 IPR008987

G3DSA:1.20.5.960
Unmapped
18–49

G3DSA:1.20.5.960 IPR027411 DC_2238

G3DSA:1.20.5.960
Unmapped
324–352

G3DSA:1.20.5.960 IPR027411

YP_004300937.1

1 1030

Architecture

ATT

STR

ATT

STR

ATT

ATT 1-184 | STR 185-312 | ATT 313-456 | STR 457-871 | ATT 872-1024 |

Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Domains [InterPro]

Domain ID	Category	Cluster	Start	End	Layer	Name	Pref Zone	Confidence	Evidence	Support
IPR036240	STR	IPR036240	1	306	Merged direct domain	Gp9-like superfamily	Central	Low	Positional only	146 proteins / 146 hits
IPR008987	ATT	DC_0752	7	184	InterPro cluster	Baseplate structural protein Gp9/Gp10, N-terminal domain	Central	Medium	Text match	242 proteins / 243 hits
G3DSA:1.20.5.960	Unmapped	-	18	49	Gene3D	Bacteriophage t4 gene product 9 (gp9)	-	-	-	-
IPR027411	Unmapped	-	66	185	InterPro	Baseplate structural protein Gp9/Gp10 middle domain superfamily	-	-	-	-
IPR027412	Unmapped	-	190	306	InterPro	Baseplate structural protein Gp9 C-terminal domain superfamily	-	-	-	-
DC_2238	STR	DC_2238	303	1008	Novel HMM	DC_2238	Central	Low	Positional only	73 proteins / 73 hits
IPR036240	STR	IPR036240	311	527	Merged direct domain	Gp9-like superfamily	Central	Low	Positional only	146 proteins / 146 hits
IPR008987	ATT	DC_0752	313	456	InterPro cluster	Baseplate structural protein Gp9/Gp10, N-terminal domain	Central	Medium	Text match	242 proteins / 243 hits
G3DSA:1.20.5.960	Unmapped	-	324	352	Gene3D	Bacteriophage t4 gene product 9 (gp9)	-	-	-	-
IPR027411	Unmapped	-	361	460	InterPro	Baseplate structural protein Gp9/Gp10 middle domain superfamily	-	-	-	-
IPR054430	TAS	DC_0704	691	810	InterPro cluster	Baseplate wedge protein gp10, domain 3	Central	High	Text match	67 proteins / 67 hits
IPR053827	ATT	DC_0313	872	1024	InterPro cluster	Baseplate structural protein Gp10, C-terminal domain	C-terminal	Medium	Text match	489 proteins / 489 hits

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout

N-terminal

Central

C-terminal

YP_004300937.1

1 1030

Domain	Start	End	Length (AA)	Confidence
N-terminal	1	168	168	0,7958
Central domain	169	433	266	0,1778
C-terminal	434	1030	596	0,3024

Note: Constraints were applied during segmentation.
Fixed 25 C-terminal predictions appearing before Central domain

Legend: N-terminal Central domain C-terminal

3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring

N-terminal
1-168

Central
169-433

C-terminal
434-1030

Taxonomy

	Name	Taxonomy ID	Lineage
Phage	Aeromonas phage 65 [NCBI]	2919549	Uroviricota > Caudoviricetes > Pantevenvirales > Emmerichvirinae > Ishigurovirus
Host	Aeromonas salmonicida [NCBI]	645	cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Aeromonadales

Coding sequence (CDS)

Genbank protein accession

YP_004300937.1 [NCBI]

Genbank nucleotide accession

NC_015251 [NCBI]

CDS location

range 82588 -> 85680
strand -

CDS

ATGTCGATTCAAAAACCAAAAGAGCTAATCGATACTGGTATACGTGGTCAAGAGGGAACGGGTGATACACTATTTGATGGTGGTGAAAAACTAAACGCAGATCTGAATAGTATGTGGAACGTGTTCGGGGATTATAGAATAGGTAAAACTTCTGGATTTGGAAACCGAGTACAAACATTGCATGGAACCGGTTATTACCAGAAACATACAAGAGCGTATTATGCAGGTTCAGAACAGCCATCAGGTAACCCTGTAGATTTTGGGTCTATGCATGATATATCAGTTACAAGAGATGGTGCGGGTGATATTACAATAAACCTTCCTGCTGGTAGTGGTCATGCGGGGGAATGTATTGAGTTGGTCAATACTGATGGTTCCGTAGGATTTGGAACCGGTAGAGAGGTAATTATCAAAACTACTGGGACCGGAGATTCTATCGGATCGTTGGGTAACAGAATGGTAATCAATAGAACCAACTTTAGAATTAGATTGTGGGTTACAGAAGGTAGTCCAGCCGGTTCTAAATGGAATTATAAATTAGATTCTATGTTTGGTGATAGTGCTACTTCATACGCTGCCAATATTCTTAATATAGCCGCTGGTGCTCAACGTAACGTAGTTCTTTTCAATAAAGCTCAATATAACGTAGTAAAGCATATGTTATTTGTAACTCAGCGTGGTGCATCTGTACATCAAGAATCTTGCGAAACTTTACTGATGGTAAATAATACCAGTAATACAGACACCAATGTATATTCAACTGAATATGCGCGTATACGAACAAGAACTCCATCAAAGCCGGAAGATAACCTTCTATTTGATGCAACTTATAGTATAACTGGAAGTTCTGTTATTTTGACAGTAACTAATATCAGTCAAACAGCAATAGATGTATACGTTAAATCTATTGATGCAATCGGGGGCATAATAACGATGAAACAGCAAATTATAATAGGTAACCGTGTTGATGACGGAACTGGTGATTATCTCCGCAAAGGGGGACAGAAGACAAACGATAACTTTAACGAGTTATATTACAATCTGGGGGATGGTAATATCCCCCATGCCGCTGGTGCATGGAAGCCATATTCAGACCATACTAAGCCTCTAAAGGCGGTTATGGGACAGGCTTGGGTTATCAACACAACCACAGGTCGGATCACAGTAGAACTACCTCTAGGGACCGTTGCTGATTACGGTAACGTGGTTCGTATTCGTGATGTTAATGGTACATGGGGTTCTAACCCAGTCCTGTTGATCCCTGCGGGTTTTAACACGGTTAAGGGTGGATCTGGAACTCACAGATTAGATAAAAACCGTATGGACGTAGAGCTTGTGTATTGCTCTCCTGGTAATTGGGAATACGTATCAAGTAAGTTCGTTGATGATATTAAATCTGGGGACGTTTCTACTGTAGCAAAACGGGAATATATTGCTACTGAAGGTCAAACCGACTTTTCTGATATATTTCCATCAGGATATAATCCCGCTGCTGTGAACGTATATAAGCGCGGTAACATTCTTTATTATGGTGCAGACTACGGTCCGGAATCTAACTACGGTTCTATCGTTGGTGTTAATCCAGCACCACAATCCAATATAGTAGTTACTCCTAAAAAACTTGATAACACTAAGTATGGATATACTAAAGGTGTTGCTAGTTCTGTTTTGACAGGTAAAGTAGAAAATATTGAGATTACAAAATTCTATATCGATGATACTAAAAACTTATCATATATTCTTTTTGATCTTAATAAAACTCCCCTGAATCAAAACTTCTTAAAGGTAACGTTCAACGGAAAAGATTACATATTCAAACAATCACCATCATCTAAAGAATACGTTTCAACTGGTGTAGTTCCTGAAATCGTAGCCGCTTTTAAAGGAACTGCTAACGTTACTTTAAAAGTTGGTGTTAGTAAAATAACAGCTCTTGATGGTTATACAATACGTTTGGATAAACCTTGTGAAGCTGGTGATGTGGTTATTGTAGAGACTTTCCTTGATGGTTTGGCTACATATAGAAGTTCATACGAAACTGCGACTATTCGTGTATATTCGAACAAACTAACACCTATAGATTATGTATCTGAGACGGGTAGACGTTATGTTGGTGATTTATCATCTAAATATCGATTCACTATTACCGAATTCGGATTCCAGCCAAACGAAACATTCAACCCGAATACGTTGGAACTTTTGGTAAACGGTCGTCAATTAGTTAAATCTGGTTCTGCTGATATCCCATTCTTTATATGTGAGGGTGCGGATGCAATAACCGAGGAATCGTGTATTGGTTCTGGTGGTGTCTGGGTTCCTTCTGGTGTGGATTATAGCCCAGTTCCGGATTCTGCGGGTATGATGAGAGATATCGTTATAAATGATGAATTGGAACATGAAGATGTTGTTACCATTCGTTGGTTTAATAACGATATAGGGTCCTTGTTAGAACTTGATGAAATACTTGGTGAAACTGATGAGAGATATATTGCATCATCCCCAGTTAACATAACTGGAAAGATTATGTATTCTGATCCATTCAGACCCGGTCCTACTACTGTTATTCCAGATCCGAATGACCAAATCGGTGTTAAAGTAAGTACGGTTTCTATGTTGTTTGATATGTTTCATCCAATCGGGACCATTTACGAAAATGCTGACAACCCAAATAACCCACAATCTTATATGGGAATGGGTGTATGGGTTCGATATGCAGAGGGAATGACAGTTGCTGGTTGGAATAGTCAAAATATGAACGATCCATTATATGGATTGAATAATAATGATTTGGATCTAAACGGGAATCCTCGCCACAGTGCGGGTGGAACCATAGGATCGAATGAGATTGTTATTCTGGCAGAAAATACCCCCGGTACAAAAAGTACAGAGAAATCACTTATATCAGATCCTGATGGTGATATTCTAGTTGGTGGTTGTCAATATGACCCAGACGAAGAAGGACCGGGATATAAAAAATACAGAGAGGATTATGTGTTGACTAGACCAAGTGCAACAGTAAACCCGATCCAAATCGTTCAACCTACAATTACAGCCCATAGATGGTTAAGGGTAGAATATGATAAATATTTATAA

Genome Context

Tertiary structure

PDB ID

ec8b1849539041d0ea2c71f32ffb683f908fecc4eb50cf8604c8cbff87122ed7

ESMFold

Source ESMFold

Method ESMFold

Resolution 0,5228

Oligomeric State monomer

Download PDB

Model Confidence

Very high
pLDDT > 90

High
90 > pLDDT > 70

Low
70 > pLDDT > 50

Very low
pLDDT < 50

Protein

Domains

Domains [InterPro]

Domains [InterPro]

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

3D Structure with Domain Coloring

Domain Coloring

Taxonomy

Coding sequence (CDS)

Coding sequence (CDS)

Genome Context

Genome Context

Tertiary structure

Predicted Aligned Error (PAE)

Model Confidence