Protein

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Genbank accession
YP_009622475.1 [GenBank]
Protein name
tail fiber protein
RBP type
TF
Evidence UniProt/TrEMBL
Probability 1,00
TF
Evidence Phold
Probability 1,00
Protein sequence
MAKYNPTVPPTKENELLPFLDDEFVRIGQSLNDVEAGFWGVSENAPEKLRPGLVKFFAAGVVGVNEGLYTYGTDDVWRYGGTVPDPKPLPGAWTVLPAALNGSAPAGNCAYRINTDKDALILTFFLTGGTISTTTKIYTLPVGARPDIDVPFPLYTQTPLIGTTLTFPPPNNPGANQYDQIINILTRATAATAISPAAYCLVKTNGDVEVTFVPNNGTLFGGTFNVPLPVSP
Physico‐chemical
properties
protein length:232 AA
molecular weight: 24720,76220 Da
isoelectric point:4,60341
aromaticity:0,10345
hydropathy:-0,00172

Domains

Domains [InterPro]

No domain annotations available.

Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Taxonomy

  Name Taxonomy ID Lineage
Phage Pseudomonas phage Bjorn
[NCBI] 		2079288 Uroviricota > Caudoviricetes > Bjornvirus >
Host Pseudomonas sp.
[NCBI] 		306 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Pseudomonadales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
YP_009622475.1 [NCBI]
Genbank nucleotide accession
NC_042103.1 [NCBI]
CDS location
range 7921 -> 8619
strand +
CDS
ATGGCTAAGTACAATCCGACAGTTCCTCCGACTAAGGAGAACGAGTTGCTCCCTTTCTTGGACGATGAGTTCGTTCGGATTGGACAAAGCTTGAATGATGTCGAGGCTGGCTTTTGGGGGGTGTCTGAGAACGCTCCCGAGAAGCTACGCCCCGGTCTCGTTAAGTTCTTCGCAGCAGGTGTCGTAGGGGTCAATGAGGGCCTCTACACTTACGGTACAGACGACGTGTGGCGCTATGGTGGCACCGTACCTGATCCTAAGCCCCTACCGGGCGCATGGACCGTCCTACCGGCTGCTCTCAATGGTTCAGCACCAGCAGGTAACTGCGCATACCGAATCAACACTGACAAGGATGCACTGATCCTTACGTTCTTTCTTACTGGTGGGACGATCAGTACAACCACAAAGATCTACACGCTTCCAGTAGGAGCAAGGCCGGACATTGACGTTCCGTTCCCTCTGTACACACAGACTCCGCTGATCGGTACAACCCTGACGTTCCCTCCACCTAACAACCCCGGTGCCAACCAATACGATCAGATCATCAACATTCTGACTCGTGCTACGGCTGCCACAGCGATCTCTCCAGCAGCTTACTGCTTGGTGAAGACCAACGGGGATGTCGAGGTCACGTTCGTTCCAAACAACGGTACTCTCTTTGGGGGTACATTCAACGTCCCACTTCCGGTGAGCCCATGA

Genome Context

Genome Context

Tertiary structure

PDB ID
5f3b6e119261e0d4378ec1e57793e108b1044d032c8a18640e8e71df6b93ce8e
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,7535
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Pseudomonas phages infecting Pseudomonas sp. isolated from Prunus avium Colberg,O., Carstens,A.B., Kot,W. and Hansen,L.H. 2013-08 — GenBank