Protein

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Genbank accession
XVB59665.1 [GenBank]
Protein name
hypothetical protein
RBP type
TSP
Evidence RBPdetect
Probability 0,87
Protein sequence
MRIQHNIDNVFQMIEGHRKCLDNNTGVTNLPTQNKLVNQDGLIASGWSGSKINNDWAMHEAQAVLILGYIEAYRASKSDFYLDRAKEAWEAYNSHLLGAYAVESKMQRLSHYPLSTDGVPSHGGFKDVVVSFTNGRGKIPAGSPTWGEYLDKAFQAYNGVLGRNTVDSDVYGGTDANPNWTTSGLSWWVEWYIAWDGNRYWANGSIADSGHTSAEFGTIQLQDKGVTGSHKVTYCVRLPQEQGGSVIPAGSPVIVNPINVVADNQAPELDGEEMWCDACYQLYTLTGEEKYYTAFKQSYNKLLNFSDINAYDKLFRKTTLIKAPFTDGTCLVAGTVPVMSRDSDGYINFRMNARQPCEIIQKGTTYKIGRDAEIVMNFGGEGVLFQPHFILNDGNNNKKQYRIGVPFGGSEVTETVAKVTDFVEVVGKDGNPYLLPKEENIAVSGGASVSMQYDTDIYNHSDNFTRCNIVRGKVTFNFGREISLNSVTYRSDDEMVRVKFLDKDRWLWYADLYATNGQWITETLTLGDFKLDPTQPHHTEDEIKPFFANPKGITSVDFSLSDRQIGNGLFDLYCVNTLPQFYVADRDAYLIWFSVWMASKTESTAKVGDCYVRNYKQGAYRHTPGVFPAGKVIDKENYLLEERPNWPYPGMQYPAVYCMGAENIDRQRLANTIGFMYDSQVWYNNTFKTEGPVASRYVWQRGNEGLTGWWEMVDNSKLQSRAFVAACRTLYELKKHKEPVDERLFLFCQKWAWFLNRFQSSHSGNLPTDFNTSGGYSYQDRGDRMWVVGEWLAGCCWLGLCGYSETIPQIDIVVEACVKLLQKHHFINGDNVLNGCWAVSDPVGYHSGEILRGLGLYAQYRGLYL
Physico‐chemical
properties
protein length:865 AA
molecular weight: 97706,50530 Da
isoelectric point:5,60082
aromaticity:0,12948
hydropathy:-0,40948

Domains

Domains [InterPro]

No domain annotations available.

Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
XVB59665.1
1 865
Domain Start End Length (AA) Confidence
N-terminal 1 10 10 0,1719
Central domain 11 265 256 0,9730
C-terminal 266 865 599 0,0707
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-10
Central
11-265
C-terminal
266-865

Taxonomy

  Name Taxonomy ID Lineage
Phage Escherichia phage vB_EcoM_YN3
[NCBI] 		3436859 Viruses > unclassified bacterial viruses >
Host Escherichia coli
[NCBI] 		562 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Enterobacterales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
XVB59665.1 [NCBI]
Genbank nucleotide accession
PV763136 [NCBI]
CDS location
range 70257 -> 72854
strand -
CDS
ATGCGTATTCAACACAACATTGATAACGTATTTCAGATGATTGAGGGGCACAGGAAGTGCCTCGATAACAACACAGGCGTTACCAATCTCCCCACGCAGAACAAACTGGTAAACCAGGATGGACTTATAGCGTCAGGTTGGTCAGGGAGTAAGATAAATAATGATTGGGCAATGCATGAAGCTCAGGCTGTGTTGATTCTGGGGTACATTGAGGCATACAGGGCATCAAAAAGCGATTTTTACCTAGATAGGGCCAAAGAAGCTTGGGAAGCCTACAACAGTCATCTTCTAGGTGCATATGCAGTAGAAAGTAAAATGCAAAGATTGTCCCACTACCCATTATCCACAGATGGGGTTCCATCACATGGCGGGTTTAAAGATGTAGTGGTGTCTTTTACCAATGGTAGAGGAAAAATCCCAGCTGGATCTCCGACATGGGGGGAATACCTAGACAAGGCATTTCAAGCGTATAACGGTGTGCTAGGAAGAAACACTGTAGACTCTGATGTTTACGGCGGCACGGATGCTAACCCAAATTGGACAACATCTGGATTAAGTTGGTGGGTTGAGTGGTATATAGCATGGGATGGTAACCGCTATTGGGCCAACGGTAGCATAGCCGACAGTGGTCATACGTCTGCAGAGTTCGGCACAATCCAACTGCAGGATAAGGGTGTTACAGGCAGCCACAAGGTAACCTACTGTGTGAGATTGCCACAAGAGCAGGGTGGATCGGTGATACCTGCTGGATCCCCTGTAATTGTAAACCCTATAAATGTGGTTGCAGACAATCAAGCCCCAGAGTTGGACGGGGAAGAAATGTGGTGTGACGCTTGTTATCAACTCTACACTTTGACAGGCGAGGAAAAGTATTACACCGCGTTTAAACAGTCTTACAACAAGTTGCTTAATTTCAGTGATATAAATGCCTACGACAAGTTGTTTAGAAAGACCACGTTGATTAAGGCACCGTTCACAGATGGTACTTGTCTCGTTGCAGGAACAGTTCCTGTCATGAGCAGGGACAGCGACGGGTATATCAATTTTAGAATGAACGCACGCCAGCCTTGCGAAATAATCCAAAAAGGGACTACATACAAGATAGGCAGAGATGCTGAAATTGTTATGAATTTCGGAGGAGAGGGGGTTCTGTTCCAGCCACATTTCATCCTTAATGATGGCAACAATAACAAAAAACAGTATAGGATAGGGGTCCCTTTTGGAGGGTCAGAGGTAACAGAGACAGTTGCCAAGGTTACTGATTTCGTAGAGGTGGTTGGTAAAGACGGTAACCCGTATCTCCTGCCAAAAGAGGAAAACATTGCCGTAAGCGGTGGCGCTAGTGTTAGTATGCAATATGATACCGACATTTACAACCACTCCGACAACTTCACCCGTTGCAACATAGTAAGAGGCAAAGTAACTTTCAATTTTGGAAGGGAGATTTCTTTAAACTCAGTAACTTATCGATCAGATGATGAGATGGTAAGGGTCAAATTTCTTGACAAAGACCGTTGGTTATGGTATGCTGATCTATATGCCACTAACGGACAATGGATAACAGAAACTCTTACCCTAGGTGATTTTAAACTAGATCCAACACAACCTCATCACACAGAAGATGAGATTAAACCTTTCTTTGCCAACCCTAAAGGAATTACCTCTGTAGATTTCAGTCTGAGCGACAGGCAGATAGGCAATGGCTTGTTCGATCTGTATTGCGTCAACACTCTGCCGCAATTTTATGTTGCAGATAGGGATGCTTATCTGATCTGGTTTAGTGTATGGATGGCAAGCAAGACAGAATCAACCGCTAAGGTTGGTGATTGCTATGTCAGGAACTACAAGCAAGGCGCATACAGACACACTCCTGGTGTGTTCCCTGCTGGAAAGGTAATAGATAAGGAAAATTATCTTCTAGAGGAAAGGCCAAATTGGCCCTATCCCGGCATGCAATACCCAGCAGTCTACTGTATGGGTGCGGAAAACATAGATCGTCAAAGATTGGCAAATACGATTGGATTTATGTACGACTCCCAAGTTTGGTATAATAACACATTTAAAACAGAAGGACCAGTTGCATCCCGCTACGTATGGCAGAGGGGTAATGAGGGGTTGACTGGTTGGTGGGAGATGGTAGATAACTCTAAACTCCAATCAAGAGCCTTTGTTGCTGCGTGCCGCACACTATATGAGCTTAAGAAACATAAAGAACCTGTTGATGAGAGACTGTTCCTGTTCTGCCAGAAATGGGCATGGTTCCTCAACAGATTCCAGTCATCTCATTCCGGAAATCTCCCTACAGACTTTAACACCTCAGGAGGATATTCTTATCAAGATAGAGGTGACAGGATGTGGGTGGTAGGTGAATGGCTTGCAGGTTGCTGCTGGCTAGGTCTTTGCGGGTATTCAGAGACAATACCTCAAATAGATATTGTTGTAGAAGCCTGCGTGAAGTTACTGCAAAAGCACCACTTCATTAACGGAGATAATGTTTTAAACGGCTGCTGGGCAGTTTCTGATCCGGTAGGCTATCACTCTGGCGAAATCCTTCGCGGTTTGGGACTTTATGCTCAATACCGTGGATTGTACCTTTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
5a4320f4e8f0d8117b5ec2722cf3e26a7c9ae0a60b4d537a4eff67fecf5dd8a7
ColabFold
Source ColabFold
Method ColabFold
Resolution 0,8611
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50