Protein

View in Explore
Genbank accession
AEV89442.1 [GenBank]
Protein name
putative virion structural protein
RBP type
TSP
Evidence RBPdetect
Probability 0,90
Protein sequence
MFDTKPIPPGSGSPIVPGNTPQRPNEGDLKRVWYLDQIFDPDIHPVQDMPKYIVPYEGELVHDVPNKRMLEVKHVDKYATWKTTFANYFLLPEKSDSDYDLFPQHEYGFLQGELALAIDYSVRPPVARVDANAVAPDAAYALLYKGAIISEKGQIISASYSGQDFIDNKITVSPVVIDNLENKVIVGCNSFSVQLNKEELKNGTRCTLVYYDAAGRPIPPTYPVVVQQCAYLRDHQLSKRYVKSIELVSPWFTNSTKPNTLFVPINLPLKQVEFRARVHYNDGGVEEHPVNSFNGTSGFSLHGVDQYKPTTPGQISDAVVLTYVFKEHEQALIADPGQPRHKSEVYEIVATPSKGAYSPRIYTYPYWDGASGWKLKHFLTDLERKYCRDVTDLVTLNEASPVFEGLKYGEEQPLIFNLNMRDVSATYEPWAFVQHTTVTLYNGATSVGRKWDVRHSYSRPPFNNMNLEFWTEVGGVTKSRFGDVTDEASFLDKGYWAFEPMLDPRAEVKAPAATHFDIVRVDGTARTAIPIGEWGNLPIGNMALNNGEGIYIRWTRRDATGAELQLGVSAAVCKKITAP
Physico‐chemical
properties
protein length:579 AA
molecular weight: 65017,68080 Da
isoelectric point:5,75292
aromaticity:0,11399
hydropathy:-0,36822

Domains

Domains [InterPro]
DC_1319
STR
1–579
DC_1319
AEV89442.1
1 579
Architecture
STR
STR 1-579
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
AEV89442.1
1 579
Domain Start End Length (AA) Confidence
N-terminal 1 32 32 0,9167
Central domain 33 234 203 0,7458
C-terminal 235 579 344 0,3804
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-32
Central
33-234
C-terminal
235-579

Taxonomy

  Name Taxonomy ID Lineage
Phage Pseudomonas phage OBP
[NCBI] 		1124849 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Pseudomonas fluorescens
[NCBI] 		294 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Pseudomonadales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
AEV89442.1 [NCBI]
Genbank nucleotide accession
JN627160 [NCBI]
CDS location
range 6927 -> 8666
strand +
CDS
ATGTTTGATACTAAACCAATCCCTCCTGGTTCGGGTTCCCCTATTGTTCCGGGGAATACGCCTCAACGTCCCAATGAAGGTGACTTGAAGCGAGTATGGTATTTGGATCAGATCTTTGATCCAGACATCCACCCAGTCCAGGATATGCCTAAGTACATTGTTCCTTATGAAGGGGAACTTGTACACGACGTACCTAATAAACGTATGCTTGAAGTTAAGCACGTTGATAAGTACGCGACATGGAAAACAACGTTTGCTAACTACTTCCTGTTACCAGAGAAGTCAGATAGCGACTACGATCTGTTTCCACAGCACGAGTACGGATTCCTGCAAGGTGAGTTGGCCCTGGCCATCGATTACTCTGTACGTCCTCCAGTTGCTCGTGTTGACGCTAACGCTGTAGCGCCTGATGCTGCTTATGCGTTACTGTATAAAGGTGCGATCATCAGTGAGAAAGGTCAGATCATTTCTGCCTCTTACTCTGGTCAAGACTTTATCGACAACAAGATTACTGTCTCTCCAGTTGTCATTGATAACTTGGAAAACAAAGTCATTGTTGGATGTAACTCATTTAGCGTCCAGCTAAACAAGGAAGAGTTAAAGAACGGTACTCGTTGCACTCTGGTTTACTATGATGCAGCAGGTCGTCCTATTCCTCCTACCTATCCGGTAGTTGTTCAGCAGTGCGCATATCTGCGTGACCATCAGTTATCGAAACGTTATGTTAAGTCTATTGAACTGGTATCACCTTGGTTCACTAATAGCACTAAACCTAACACTCTGTTCGTCCCAATCAACTTACCGTTGAAACAAGTCGAGTTCAGAGCACGTGTTCACTATAACGATGGGGGTGTTGAAGAACATCCTGTTAACTCGTTTAACGGAACAAGTGGTTTCTCCCTGCATGGTGTTGATCAATACAAACCGACTACACCAGGTCAGATATCTGATGCAGTCGTATTGACCTACGTGTTCAAGGAACATGAACAAGCTCTGATTGCCGATCCTGGTCAGCCACGCCATAAGTCCGAAGTATATGAGATTGTCGCTACTCCTTCTAAAGGTGCGTACAGTCCTCGTATCTACACTTATCCGTATTGGGATGGTGCATCCGGTTGGAAACTTAAACACTTCCTTACCGACCTGGAACGTAAGTACTGTCGTGACGTTACCGATCTGGTAACACTGAATGAAGCATCTCCAGTGTTCGAAGGTCTGAAGTACGGTGAAGAACAGCCATTGATCTTCAACCTGAACATGCGTGATGTTTCCGCTACTTACGAACCATGGGCATTCGTCCAACACACTACCGTTACGCTTTACAACGGTGCGACCTCTGTTGGTCGTAAGTGGGATGTCCGTCACTCTTACAGTCGTCCTCCGTTCAATAACATGAACCTCGAGTTCTGGACTGAAGTAGGTGGCGTTACTAAGTCTCGCTTCGGTGATGTTACGGATGAAGCAAGCTTCCTGGACAAAGGTTATTGGGCATTCGAACCAATGCTGGATCCTCGTGCAGAAGTTAAAGCTCCGGCTGCTACTCACTTCGACATCGTCCGTGTTGATGGCACAGCTCGTACCGCAATCCCTATCGGGGAATGGGGTAACTTGCCAATCGGAAACATGGCACTGAACAACGGTGAAGGTATCTACATCCGTTGGACTCGTCGTGATGCAACTGGTGCTGAACTTCAGCTGGGCGTATCCGCAGCAGTTTGTAAAAAGATCACTGCACCATAA

Genome Context

Genome Context

Tertiary structure

PDB ID
f15a9e80daceb08aa16af2bd8a034616e0c76b9a00677ffde764069d82305b51
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,3719
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50