Protein

View in Explore
Genbank accession
QIG74977.1 [GenBank]
Protein name
tail fiber protein
RBP type
TF
Evidence Phold
Probability 1,00
TF
Evidence RBPdetect
Probability 0,90
Protein sequence
MVDLKQRIDQLPATLVPSLNHEFPAMKDGLTVKLKVQQIIDLLVNGAPSALDTWLELVAAIQADQTGIAALTTAVANRVRFDAAQTLTALQQAQAIANIGASDLAADYIQGMKLSNDPGFPTTRIVVAPGRVKAGSVVVSNLTNLTKRMDQTWVAGNNGGGMDTGTVLAGDTLFLYALQKTADGSFDWVFSKSATVAGVNTSLLSGYTVVAMIGVLPRIDNGPAILPFVMNDGDDYTLVTPTQDATNLAVGTTNQLVPVIRMPAGIKVKAKLRGLFNSASTTNSCLVHSPDQGTLVAGGGASGGNIGTPQVASGYTSTYLGPIWTDTNRNVRAVAGASGTLNMWCDGFIFPLGRK
Physico‐chemical
properties
protein length:355 AA
molecular weight: 37047,90540 Da
isoelectric point:6,72283
aromaticity:0,05915
hydropathy:0,15239

Domains

Domains [InterPro]

No domain annotations available.

Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Taxonomy

  Name Taxonomy ID Lineage
Phage Rhizobium phage RHph_I65
[NCBI] 		2509738 No lineage information
Host No host information

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
QIG74977.1 [NCBI]
Genbank nucleotide accession
MN988541.1 [NCBI]
CDS location
range 38605 -> 39672
strand +
CDS
ATGGTCGATCTCAAGCAAAGAATAGACCAACTCCCGGCGACCCTCGTTCCTTCGCTGAACCATGAGTTTCCGGCGATGAAAGACGGGTTGACGGTAAAGCTCAAGGTCCAGCAGATCATCGATCTGCTGGTCAACGGCGCTCCCAGCGCTCTCGATACGTGGCTTGAGCTTGTCGCTGCGATCCAGGCAGACCAGACCGGCATAGCCGCGCTCACGACGGCGGTGGCTAACCGTGTCCGCTTCGACGCCGCACAGACGTTAACGGCTCTTCAGCAGGCCCAGGCGATTGCGAATATCGGCGCGAGCGACTTGGCTGCCGATTACATTCAGGGGATGAAGCTCAGCAACGATCCAGGCTTTCCAACCACCCGCATTGTTGTGGCGCCCGGTCGAGTGAAAGCCGGGAGTGTGGTTGTTAGCAATTTGACCAACCTCACAAAGCGAATGGATCAGACCTGGGTCGCCGGTAACAATGGTGGCGGCATGGATACAGGCACGGTCCTTGCTGGGGATACCCTGTTTTTGTACGCCCTGCAAAAGACGGCTGACGGCTCTTTCGATTGGGTGTTCTCCAAATCTGCGACGGTCGCGGGCGTCAATACCTCTCTGCTTTCCGGCTATACGGTGGTGGCTATGATCGGGGTTCTTCCCCGTATCGACAACGGTCCCGCCATCCTCCCCTTCGTGATGAACGACGGCGACGATTATACATTGGTAACTCCCACCCAGGATGCTACCAATCTTGCGGTTGGTACTACCAATCAACTTGTGCCCGTTATCCGAATGCCTGCCGGCATCAAGGTAAAGGCAAAGTTGCGGGGTCTGTTTAACTCCGCATCTACAACAAACTCTTGTCTTGTTCATAGCCCAGACCAGGGGACGCTCGTGGCTGGCGGCGGCGCTTCCGGCGGTAACATCGGTACTCCGCAAGTTGCCAGCGGCTACACGTCCACCTATCTCGGCCCCATCTGGACCGATACCAACCGAAACGTGAGAGCCGTCGCTGGGGCGTCGGGCACCCTCAATATGTGGTGCGACGGCTTCATTTTCCCTCTTGGGAGAAAGTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
8c2606133589819a6471acb64797d284662e36788d2d6ab702d8182d13dc17d4
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,8647
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Patterns of diversity and host range of bacteriophage communities associated with bean-nodulatin bacteria Vann Cauwenberghe,J., Santamaria,R.I., Bustos,P., Juarez,S. and Gonzalez,V. 1998-01 — GenBank