Protein

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Genbank accession
UMW87813.1 [GenBank]
Protein name
tail fiber protein
RBP type
TF
Evidence GenBank
Probability 1,00
TF
Evidence RBPdetect
Probability 0,88
Protein sequence
MALSVQRATSDGTMTSIVLSIEFFDTRDIFVMLGETPAIEGTDYTWQGRTQINFTNAPLADGVEVTLTRRTNRTALRHIFSEGAEFTRANLDDAHTQLLYLSQEMTEGSGISDFYGDLDMHRYRVRNMAQGTENRDAVTFLQLKEVADRVTAIENIKGTNRRGPITISTKSPDTVPVQYEEWVMIGDVDNGAFVNSSNDKDQE
Physico‐chemical
properties
protein length:203 AA
molecular weight: 22754,97920 Da
isoelectric point:4,66685
aromaticity:0,07882
hydropathy:-0,45764

Domains

Domains [InterPro]
DC_1609
STR
1–202
DC_1609
IPR005604
ATT
4–108
IPR005604
UMW87813.1
1 203
Architecture
ATT
STR
ATT 1-108 | STR 109-202 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Taxonomy

  Name Taxonomy ID Lineage
Phage Vibrio phage OY1
[NCBI] 		2923285 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Vibrio sp.
[NCBI] 		678 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Vibrionales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
UMW87813.1 [NCBI]
Genbank nucleotide accession
OM799543.1 [NCBI]
CDS location
range 33727 -> 34338
strand +
CDS
ATGGCATTAAGTGTACAACGTGCTACGAGCGACGGTACTATGACCAGCATCGTCCTCAGCATTGAATTCTTTGACACGCGTGACATTTTCGTTATGCTTGGTGAGACACCTGCAATCGAGGGTACAGATTACACTTGGCAGGGTCGAACACAAATTAACTTTACTAACGCCCCGTTAGCTGATGGGGTGGAGGTTACGCTTACACGGCGTACCAACCGCACTGCGCTGCGTCATATCTTCTCTGAGGGTGCTGAGTTCACCCGAGCTAACTTAGACGACGCGCACACACAATTGCTGTACCTAAGTCAAGAAATGACCGAGGGTTCTGGCATTAGCGATTTCTATGGTGACTTGGATATGCACCGCTACCGAGTGCGTAACATGGCACAAGGTACGGAGAACCGAGACGCTGTAACGTTCCTCCAATTGAAAGAGGTTGCAGACCGTGTAACCGCAATTGAGAACATTAAGGGTACGAACCGCCGAGGCCCAATCACTATCTCCACTAAGTCCCCTGACACCGTTCCGGTTCAGTACGAGGAATGGGTGATGATTGGTGATGTGGACAATGGTGCGTTCGTTAACTCATCTAACGATAAAGACCAAGAGTAG

Genome Context

Genome Context

Tertiary structure

PDB ID
0acbe2e117aa2e55d96e995fafa08ec281da9a4f53dcb526a330fd3ffc3f074b
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,8074
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Isolation and characterization of a lytic vibriophage OY1 and its biocontrol effects against Vibrio spp. Gao,L., Ou-Yang,M., Li,Y., Yang,Z.-Q. and Gao,S. — — GenBank