Protein

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Genbank accession
YP_010053034.1 [GenBank]
Protein name
tail length tape measure protein
RBP type
TF
Evidence RBPdetect
Probability 0,87
Protein sequence
MATVIDSLIVSLGLDNKDFQRGMKDTEKGLSDTRKNTDRVGKQIAASGKDAAEFFGHMQRSAIKFFAVLTAGKGLINFTRDVVSTGANLSRLSKNLNISADTMHRWGKASELNGGSMEGFLGTLQNLNNQVTEIFMKGDSAITPYLRQLGVSVTDAAGKAKPLTDVLGDIADATEKAFPDRQQRYAYLQQMGFDEGTINLIAKGGKELRATLAAQQGFSQKDADAAYKAEQTWIKAQQRLEKLTRDLVIKVLPSLERLAESFVKMTEVIIPPLSKAVEIFAELDEKTDGWSTSLLLALATLRLIGGSSVIGGLAGLSTTLAGLAAGTASLFAPLGAMLYSGKLNSNEDEALKQLYGENYMGPTAANKPGTSVAERHNNPGNLVFAGQRGATVGETVAGHTFARFKSTEEGVAALYRQLQLYQKRGIDTLTEVMGVYAPEGANNTGAYINALSKSTGLDPNQQLNFGDPATAAAMIRGISQHEAGKSYLNDQQILSGINLAQGGGGGSQSISIGQITVNTAAKDARGVAAELKGEIVRQFDAGMR
Physico‐chemical
properties
protein length:544 AA
molecular weight: 57810,76830 Da
isoelectric point:7,75104
aromaticity:0,06250
hydropathy:-0,20938

Domains

Domains [InterPro]

No domain annotations available.

Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Taxonomy

  Name Taxonomy ID Lineage
Phage Aeromonas phage 4_D05
[NCBI] 		2588099 Uroviricota > Caudoviricetes > Kunmingvirus >
Host Aeromonas rivipollensis
[NCBI] 		948519 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Aeromonadales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
YP_010053034.1 [NCBI]
Genbank nucleotide accession
NC_054466 [NCBI]
CDS location
range 33673 -> 35307
strand +
CDS
ATGGCAACAGTGATTGATAGCCTGATAGTTTCCCTGGGGCTGGATAACAAAGATTTCCAGCGAGGCATGAAGGACACCGAAAAAGGATTGTCCGACACCCGCAAGAACACCGACCGGGTGGGCAAGCAGATCGCCGCATCCGGCAAGGACGCCGCCGAGTTCTTTGGCCATATGCAGCGGTCTGCCATAAAATTTTTTGCCGTACTCACTGCTGGCAAGGGGCTGATCAACTTCACCCGTGATGTTGTTAGCACCGGTGCCAACCTATCCCGCCTGTCCAAGAACCTGAACATTTCCGCCGACACTATGCACCGCTGGGGTAAAGCCAGCGAGCTGAACGGCGGCAGCATGGAGGGGTTTCTTGGCACCCTGCAGAACCTGAACAACCAGGTCACTGAAATCTTCATGAAGGGTGACAGCGCGATCACCCCGTACCTGCGCCAGCTCGGCGTCAGCGTCACCGACGCAGCCGGCAAGGCGAAGCCGCTAACCGACGTCCTGGGTGATATTGCCGACGCCACGGAGAAGGCATTCCCTGACCGCCAGCAGCGATACGCATACCTGCAGCAAATGGGCTTCGATGAAGGCACAATTAACCTGATTGCCAAGGGAGGCAAGGAGCTTCGCGCCACTCTGGCAGCCCAGCAAGGATTCAGCCAGAAGGACGCTGATGCCGCATACAAGGCAGAGCAGACTTGGATAAAGGCCCAGCAGCGGCTGGAGAAGCTGACCCGGGATCTGGTGATCAAGGTGCTGCCGTCGCTTGAGCGCTTGGCCGAGTCGTTCGTCAAGATGACCGAGGTCATCATTCCGCCATTGTCCAAAGCCGTTGAGATATTCGCTGAGCTGGACGAGAAAACGGATGGGTGGAGCACTTCGTTGTTGCTGGCACTGGCAACCTTGCGCTTGATCGGAGGGTCTTCTGTGATTGGAGGACTTGCAGGTCTGTCAACCACTCTTGCCGGGTTGGCTGCTGGCACAGCCTCCTTGTTTGCCCCCCTTGGTGCAATGCTTTACTCGGGGAAGCTTAACAGCAACGAGGACGAGGCGCTAAAGCAGCTGTACGGCGAAAACTACATGGGCCCAACCGCCGCCAATAAGCCGGGAACCTCCGTGGCAGAGCGCCACAACAACCCTGGCAATCTGGTGTTTGCCGGTCAGCGAGGGGCCACGGTTGGCGAGACAGTGGCCGGCCACACCTTTGCCAGGTTCAAGAGCACCGAGGAAGGCGTCGCTGCCCTATACCGCCAGTTGCAGCTGTACCAGAAGCGCGGCATTGACACCCTGACAGAGGTGATGGGCGTCTATGCGCCGGAGGGGGCAAACAACACTGGGGCCTACATTAATGCGTTGTCCAAATCAACAGGCCTTGACCCGAACCAGCAACTCAACTTTGGCGACCCGGCGACGGCAGCAGCCATGATCCGGGGCATAAGCCAGCATGAGGCTGGCAAGTCATACCTGAACGACCAGCAGATCCTGAGCGGCATCAACCTGGCACAGGGTGGTGGCGGCGGCAGCCAAAGCATCAGTATCGGGCAGATCACCGTGAACACGGCGGCGAAGGATGCCAGGGGCGTGGCAGCGGAGCTGAAAGGAGAGATTGTGCGGCAGTTTGATGCGGGGATGAGGTGA

Genome Context

Genome Context

Tertiary structure

PDB ID
5b567c20d043f8068f255f60035ec85a498ddf06dc874f0ffbe8327a9f1ecaac
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,8023
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Nine Novel Phages from a Plateau Lake in Southwest China Provide Insights into Aeromonas Phage Diversity Xiao,W. and Bai,M. 2019-07-05 — GenBank