Protein

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Genbank accession
YP_010300970.1 [GenBank]
Protein name
hypothetical protein
RBP type
TSP
Evidence RBPdetect
Probability 0,64
Protein sequence
MLYLYSKDFISTSNREVLFYSSALYDPPDNIKPNNAALNVLRKARSVLGEDGFLNPIAGVWDGSRYVTFLRWGITQDSFDLLNLCTGDRSNDPVSPLTSKRSGYYSTYGDGTINTVALLTGAAPVRSNVDYQFTNPTFSGTLGITYTYDVQQVSGTKQPNQTYEIQYLVSPLGSSSRYSGVTTMTFSSDPCAVSYGRRFPKSSRAETVVTSVYSGGLPLSTTSDARESVILDCFLMYDPASGVFKKYGAEMIASPIGTLTPGNRYSVALNSRGNHATIDL
Physico‐chemical
properties
protein length:280 AA
molecular weight: 30524,73680 Da
isoelectric point:6,57885
aromaticity:0,11429
hydropathy:-0,22750

Domains

Domains [InterPro]

No domain annotations available.

Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
YP_010300970.1
1 280
Domain Start End Length (AA) Confidence
N-terminal 1 10 10 0,0429
Central domain 11 209 200 0,7415
C-terminal 210 280 70 0,9463
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-10
Central
11-209
C-terminal
210-280

Taxonomy

  Name Taxonomy ID Lineage
Phage Erwinia phage pEa_SNUABM_32
[NCBI] 		2869555 Uroviricota > Caudoviricetes > Alexandravirus >
Host Erwinia amylovora
[NCBI] 		552 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Enterobacterales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
YP_010300970.1 [NCBI]
Genbank nucleotide accession
NC_061444 [NCBI]
CDS location
range 166440 -> 167282
strand -
CDS
ATGCTCTATCTTTACTCAAAAGATTTTATAAGCACGTCAAACCGCGAAGTTCTCTTTTATTCCAGCGCTCTATACGACCCTCCGGATAATATAAAGCCAAACAACGCTGCGTTAAATGTGTTGCGTAAAGCTCGCTCAGTTTTAGGTGAAGATGGTTTCTTGAATCCAATAGCCGGAGTATGGGATGGTTCTCGGTATGTCACTTTTCTCCGTTGGGGAATAACTCAGGATTCTTTTGATCTCCTCAATCTTTGCACAGGGGACAGATCGAATGATCCCGTATCTCCTCTGACGTCTAAGCGCAGCGGTTACTACAGCACGTATGGTGACGGCACCATCAATACCGTTGCCTTACTTACAGGTGCTGCGCCAGTAAGATCAAACGTCGATTATCAGTTCACTAATCCGACGTTTAGTGGTACTCTAGGCATTACTTACACCTACGATGTTCAACAAGTCTCTGGGACAAAGCAGCCAAATCAAACATACGAAATACAATACCTAGTCAGTCCATTAGGATCTTCGAGTAGATATAGTGGTGTCACTACTATGACATTTTCTTCTGACCCTTGTGCTGTGTCGTATGGACGTCGTTTTCCTAAATCATCTCGTGCAGAAACAGTAGTAACTTCTGTTTACTCTGGGGGCTTACCTTTGTCCACTACTTCGGATGCGAGAGAGAGTGTTATTCTGGATTGCTTCCTCATGTACGATCCCGCTTCTGGTGTGTTCAAGAAATATGGTGCTGAGATGATTGCCTCACCTATAGGTACTCTTACACCAGGAAACAGATATTCAGTAGCTTTGAACAGCCGTGGGAACCATGCAACTATCGATCTATAG

Genome Context

Genome Context

Tertiary structure

PDB ID
e4075e743a2367104e9ea379fbe287bcebd07f2395ad211ba3f9d5552e6c9157
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,2710
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Complete genome sequence of Erwinia phage pEa_SNUABM_32 Kim,S.G. and Park,S.C. 2021-01-07 — GenBank