Protein

View in Explore
Genbank accession
YP_009851590.1 [GenBank]
Protein name
tail fiber protein
RBP type
TF
Evidence GenBank
Probability 1,00
TF
Evidence Phold
Probability 1,00
TF
Evidence RBPdetect
Probability 0,71
TF
Evidence RBPdetect2
Probability 0,96
Protein sequence
MSDMSTINSSTSDAIDQLVVDAGRMHKVINGTAAETITVEDGSLIPSLRKAMLENLYYKTPVLDWQKGSVTQVFNQLYAFTEPTSNAVSWWYAPSATATNPVSMGDSPATDSNWRVVLDSATLTGLYATIDSPNFTGLPTAPTMDDDDNSTSIATTAFVNALILKVFQDINAEKIDAATITVTGDASIFNLSATDAAVTGKLTVQDLEILGEVTGIQTSVDGEDIAPKSITTTEKLEVGGDTTLHGTFQIADKTILLGDGTVVDLTNIGSAGTVAVSADLDSVVGNDNFVWDATSLNTPILGSSGKGVSIAKTATDVTQVTWPDGETSPWTRVLSGTTWSAWKNAISSNAEAVEGTATNIAVSPAGMAAFVAQYGIGTDSLTNVADLDDVTVGSGFSYSSGAENAPTSGAGGRGIVLPTSPGNATQLVIENVAGNMYIRYSADGTWAAWQQFQGEPGTDGNDGAPGASAYEIYLGTVPEGETPMTQQEWLASLQGSSFTVNATGTTAERDNYDTEAKGFAFLDTTTGLLYIKNSATSADWSDGIPFKGDAGTPGVNGSTWYNGSGAPASATGANGDFYLDTTALDVYKKVSNAWSVITNLQGSVWITGTAAPTSTVGKNGDLYLVLTTDTTASTNGNVYQKASGSWTSVGNIRGPAGSGSSYTLPIASATVLGGVKIGSGVSIAADGTISVTGGGSVTFATTAEAQAATSTTVVMSPARTREFMEKHGFTASFTTQATDLNSVVTGDLFNYASTTLNIPGTGGYGRGIAIPSGTGYVTQLAIENDSNLMFIRYQTNGTWGAWAQASGGSGGSVTFATTAEAQAGTSTTVAMSPARTREQFEPLGFGSTYTNEVANLNTLTKGQFFNWGASSTNTPVASSYGRGIMIPAGTGYATQLGIVNDTGATYVRFNNNGTWTSWVAVGGSGTAAVMKASGTGHAAGLAPDPGATAGTTKFLREDATWAVPAGGSGGGGGAAVFTAGQLTNTISLNASSATTIAMTAGTTTIDSTMLYKFSAVLLLQGPAGAKVDLTLTDIGPDIFRMRAHFTKADGTIGSARSTQASGAMTVELFDQDSTIIVDGIMHSSYYGTNGPQFQGKINTGDWCNAIKGSVITMTPIVTVPST
Physico‐chemical
properties
protein length:1122 AA
molecular weight: 115114,56910 Da
isoelectric point:4,32195
aromaticity:0,07932
hydropathy:-0,04474

Domains

Domains [InterPro]
DC_0062
STR
1–495
DC_0062 cd19958 DC_0568
IPR058969
ATT
10–116
IPR058969 cd19958 DC_1360
cd19958
STR
847–921
cd19958
YP_009851590.1
1 1122
Architecture
ATT
STR
ATT 1-116 | STR 117-1122
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Taxonomy

  Name Taxonomy ID Lineage
Phage Erwinia phage pEp_SNUABM_01
[NCBI] 		2601643 Uroviricota > Caudoviricetes > Vequintavirinae > Henunavirus SNUABM01 >
Host Erwinia pyrifoliae
[NCBI] 		79967 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Enterobacterales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
YP_009851590.1 [NCBI]
Genbank nucleotide accession
NC_048807.1 [NCBI]
CDS location
range 38443 -> 41811
strand -
CDS
ATGTCCGACATGTCCACAATCAACTCTTCTACCAGTGACGCAATTGACCAGTTGGTTGTTGATGCTGGGAGAATGCACAAGGTAATCAACGGCACCGCCGCAGAGACTATCACCGTTGAAGACGGCAGTCTGATTCCCTCCCTGCGTAAAGCGATGTTGGAAAACCTGTATTACAAGACCCCGGTGCTGGACTGGCAGAAAGGGAGTGTTACCCAGGTCTTCAACCAACTGTACGCCTTTACAGAACCGACCTCCAACGCAGTGTCTTGGTGGTACGCTCCGAGCGCCACCGCTACCAACCCGGTAAGCATGGGCGATAGCCCAGCGACAGATTCTAACTGGCGTGTAGTTCTGGACTCTGCGACACTGACAGGTCTGTATGCGACAATTGACAGCCCTAACTTCACAGGTCTGCCAACAGCACCAACAATGGACGATGACGACAACAGCACCTCGATTGCAACTACAGCTTTCGTAAACGCACTGATCCTCAAAGTCTTCCAAGACATCAACGCAGAAAAAATTGACGCTGCAACCATCACTGTAACAGGTGACGCTTCAATTTTCAACTTATCTGCAACAGATGCAGCCGTTACTGGAAAACTGACCGTACAGGATCTCGAAATCCTTGGTGAAGTTACTGGTATCCAGACCTCTGTTGATGGTGAAGACATCGCTCCAAAGAGTATCACAACAACCGAGAAATTGGAAGTTGGTGGTGACACCACACTGCACGGTACATTCCAGATTGCGGACAAAACAATCCTGCTGGGAGATGGGACGGTTGTAGACCTGACCAATATCGGTTCCGCTGGGACTGTTGCTGTATCTGCGGATCTCGACTCCGTTGTTGGTAACGACAACTTTGTGTGGGATGCGACATCCTTAAACACACCGATCCTCGGGTCTTCTGGTAAAGGTGTCTCTATCGCAAAAACAGCGACAGATGTTACCCAAGTCACATGGCCTGATGGGGAGACCTCTCCTTGGACTCGTGTACTTTCCGGTACAACATGGTCGGCTTGGAAGAACGCTATCTCCTCTAACGCAGAAGCGGTTGAAGGTACGGCAACCAACATCGCTGTCTCTCCTGCTGGTATGGCTGCTTTTGTGGCTCAGTACGGTATTGGGACAGACTCCCTGACCAACGTGGCGGATCTCGACGATGTGACTGTTGGTAGTGGTTTCAGCTATAGTTCAGGTGCTGAGAATGCTCCTACTTCTGGTGCCGGAGGGCGAGGTATCGTACTGCCTACTTCTCCAGGTAACGCTACTCAACTTGTGATCGAGAACGTTGCAGGGAACATGTACATCCGTTACAGTGCAGACGGGACATGGGCAGCTTGGCAGCAGTTCCAAGGTGAGCCAGGTACTGACGGTAACGATGGTGCTCCCGGCGCTTCTGCATATGAGATCTATCTGGGGACTGTGCCGGAAGGTGAAACACCGATGACGCAGCAAGAGTGGCTTGCCTCTCTCCAGGGTAGTTCATTCACTGTGAATGCTACGGGTACAACAGCAGAACGTGACAACTACGACACTGAGGCCAAAGGTTTTGCATTCCTGGATACAACAACCGGGTTGCTTTACATCAAAAACTCAGCGACCTCTGCGGACTGGTCAGACGGTATTCCTTTCAAAGGGGATGCAGGAACACCAGGTGTCAATGGTTCAACTTGGTATAATGGGTCAGGAGCACCTGCTTCTGCGACAGGAGCTAATGGTGACTTCTACCTTGACACAACCGCTCTGGATGTCTACAAAAAGGTTTCCAACGCTTGGAGTGTTATCACCAACCTTCAAGGTTCTGTCTGGATCACAGGTACAGCCGCACCAACCTCAACTGTAGGGAAGAATGGCGACCTCTACTTGGTTCTTACAACGGACACAACTGCCTCTACAAACGGAAACGTTTATCAGAAGGCGTCCGGCTCTTGGACATCCGTAGGTAACATCCGTGGGCCAGCAGGGTCAGGTTCCTCATACACCTTACCGATTGCTTCTGCAACCGTATTGGGTGGTGTGAAGATCGGTTCTGGTGTTAGCATCGCGGCTGATGGTACTATCTCTGTTACAGGAGGAGGATCAGTCACTTTCGCAACAACAGCAGAGGCCCAAGCCGCAACATCAACCACTGTTGTTATGTCTCCGGCAAGAACCCGTGAGTTCATGGAGAAACATGGTTTTACAGCTTCCTTCACAACCCAGGCAACTGACCTGAACAGCGTTGTGACGGGCGATCTGTTCAACTATGCCAGCACAACCCTGAACATCCCCGGAACTGGTGGCTATGGTCGTGGTATCGCAATCCCTTCTGGGACAGGATATGTCACACAGCTTGCCATTGAGAATGACTCCAATCTGATGTTCATTCGTTACCAGACAAATGGTACATGGGGTGCATGGGCGCAGGCGTCCGGTGGAAGCGGAGGTTCTGTAACGTTTGCAACCACTGCGGAAGCACAGGCAGGCACATCCACTACGGTGGCAATGTCTCCAGCACGTACTCGTGAGCAGTTCGAGCCTTTAGGTTTCGGATCTACTTACACCAACGAAGTTGCAAACCTGAACACCCTGACGAAAGGTCAGTTCTTTAACTGGGGAGCCTCTTCCACTAACACACCAGTGGCGAGTTCTTACGGTCGAGGAATCATGATCCCAGCAGGGACAGGATATGCCACTCAGTTGGGTATCGTCAACGACACAGGGGCAACCTATGTCCGTTTCAACAACAACGGAACATGGACTTCTTGGGTAGCAGTTGGTGGTAGTGGTACAGCGGCTGTTATGAAGGCGTCCGGTACGGGACACGCAGCAGGTCTGGCTCCTGATCCAGGTGCAACGGCAGGTACTACCAAATTCCTCCGTGAGGATGCAACTTGGGCGGTTCCAGCAGGTGGTTCTGGTGGAGGTGGCGGCGCGGCTGTGTTCACAGCGGGTCAGCTAACTAACACGATCAGTCTTAATGCTTCATCTGCGACAACAATCGCAATGACTGCGGGTACGACAACAATTGACAGCACGATGCTTTATAAGTTCTCTGCTGTTCTCCTGTTGCAAGGGCCAGCAGGTGCTAAAGTTGATCTGACGTTGACTGACATCGGGCCGGACATCTTCCGCATGAGAGCGCACTTCACCAAAGCTGACGGTACTATCGGGTCTGCCCGTTCTACCCAGGCTTCTGGAGCAATGACGGTTGAACTGTTCGACCAGGACAGCACAATCATTGTTGATGGGATCATGCACTCTTCTTACTACGGTACTAACGGGCCGCAGTTCCAAGGAAAAATCAACACAGGTGATTGGTGTAACGCAATCAAAGGGTCTGTCATCACGATGACTCCGATTGTAACTGTACCATCCACATAA

Genome Context

Genome Context

Tertiary structure

PDB ID
51c2e25e1f28f1846947738d1ba420aa87af19785e0d33590d97f6cdcd3ac3d0
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,6678
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Complete genome sequence of bacteriophages infecting Erwinia pyrifoliae Kim,S.G. and Park,S.C. 2015-11-24 — GenBank