Protein

View in Explore
Genbank accession
QKN86107.1 [GenBank]
Protein name
tail fiber protein
RBP type
TF
Evidence Phold
Probability 1,00
TF
Evidence RBPdetect
Probability 0,86
Protein sequence
MKLKLSNVFRDFKKDVESNFKEIDKLLTELLDIKSKTSNKYLDSLIDTLFTKRYDQLQKEIRAIVLPEMSPLAITEDYEKSLSDLKGERHTSLKSRLDADLNQIKSQSQKTANDDRFIVTENGTIFADFVKKSKTIKSAKKIGIIGDSVAKGSRASKNFGKYLSEKLGATVQNEAVSGATMSTVKANSIYEQAAKIRGMDLVIIQGTDDDWLYNGSTGVQIGTSKTNEKTFYGAFCKTVELIKSNNPKAKILVMTATRQLPVNGTTIRRKDTDKNSLGLDLEAYVNAQVLACSELNVPVFDAYHTDLLDPYNPAFRVKNMVDGLHPNEFGHEVIMHELLKNYYYFYG
Physico‐chemical
properties
protein length:347 AA
molecular weight: 38990,02150 Da
isoelectric point:8,81961
aromaticity:0,08357
hydropathy:-0,43804

Domains

Domains [InterPro]
DC_0665
ATT
1–105
DC_0665 IPR051532
SSF52266
STR
135–340
SSF52266
IPR036514
STR
137–346
IPR036514
cd00229
ENZ
142–340
cd00229
IPR013830
ENZ
145–332
IPR013830
QKN86107.1
1 347
Architecture
ATT
STR
ATT 1-105 | STR 135-346 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Taxonomy

  Name Taxonomy ID Lineage
Phage Staphylococcus virus pSp_SNUABM-J
[NCBI] 		2736346 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Staphylococcus pseudintermedius
[NCBI] 		283734 cellular organisms > Bacteria > Bacillati > Bacillota > Bacilli > Bacillales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
QKN86107.1 [NCBI]
Genbank nucleotide accession
MT423823.1 [NCBI]
CDS location
range 772 -> 1815
strand +
CDS
ATGAAGTTAAAGTTATCTAATGTGTTTCGTGATTTTAAAAAAGATGTTGAAAGTAATTTTAAAGAAATTGATAAGTTACTAACTGAGTTACTCGACATTAAAAGCAAAACGAGTAATAAATATTTGGACAGTTTGATTGATACACTTTTTACTAAACGATATGATCAACTGCAAAAAGAAATCAGAGCAATTGTGTTGCCTGAAATGTCCCCTCTTGCAATTACAGAGGATTATGAAAAGAGTTTAAGTGATTTAAAAGGAGAACGACATACATCACTCAAATCACGATTAGATGCAGATTTAAATCAAATTAAAAGTCAATCTCAAAAGACTGCTAATGATGATAGATTTATCGTGACTGAAAACGGTACAATCTTTGCTGATTTTGTTAAAAAGTCAAAGACAATCAAAAGTGCTAAAAAAATTGGGATTATCGGCGATTCTGTTGCAAAAGGTAGTAGAGCTAGTAAAAATTTTGGTAAATACCTGTCTGAAAAGTTAGGTGCTACTGTACAGAATGAAGCGGTAAGCGGTGCTACTATGTCAACAGTAAAGGCTAATTCTATTTATGAGCAAGCTGCAAAAATTAGAGGAATGGATTTAGTTATCATTCAAGGGACCGATGACGACTGGTTGTATAACGGCTCGACAGGTGTTCAAATTGGAACAAGTAAAACAAACGAAAAAACGTTTTACGGTGCTTTTTGTAAAACAGTTGAATTGATTAAGTCTAACAATCCTAAAGCAAAAATATTAGTGATGACAGCAACACGTCAATTACCTGTCAACGGTACCACAATCAGACGTAAAGACACAGATAAGAATAGTCTAGGGCTTGATTTAGAAGCGTATGTAAATGCGCAAGTGCTTGCATGTTCAGAACTTAATGTACCCGTTTTTGATGCGTATCACACAGACTTGTTAGACCCTTACAATCCGGCATTTCGTGTTAAAAACATGGTTGATGGATTGCATCCTAATGAGTTTGGACACGAAGTGATTATGCATGAACTGTTAAAAAATTACTACTACTTTTACGGATAA

Genome Context

Genome Context

Tertiary structure

PDB ID
a29b39e7d34b8ca47b346a206e7142f68dad8dda05696470ef28252f0712dd13
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,8007
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Two novel bacteriophages control multidrug- and methicillin-resistant Staphylococcus pseudintermedius biofilm Kim,S.G., Kwon,J. and Park,S.C. — — GenBank