Protein

View in Explore
Genbank accession
QZI85843.1 [GenBank]
Protein name
tail fiber protein
RBP type
TF
Evidence Phold
Probability 1,00
Protein sequence
MFSPVGKIISGEATRSVVLTPPWWGSRPIGSLPVPDFKIEGHVYQRDDEGNDTPIYLCRVRLHYRPNGVAIATTKTDRNGFYRFDDLMPDIAYYYVVAFDPDGGVNQNAVILDKLSTVPA
Physico‐chemical
properties
protein length:120 AA
molecular weight: 13404,03220 Da
isoelectric point:5,54597
aromaticity:0,11667
hydropathy:-0,23167

Domains

Domains [InterPro]
DC_0374
STR
4–120
DC_0374
SSF117074
STR
36–109
SSF117074
IPR013783
STR
38–116
IPR013783
QZI85843.1
1 120
Architecture
STR
STR 4-120
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Taxonomy

  Name Taxonomy ID Lineage
Phage Stenotrophomonas phage Suso
[NCBI] 		2859662 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Stenotrophomonas maltophilia
[NCBI] 		40324 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Lysobacterales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
QZI85843.1 [NCBI]
Genbank nucleotide accession
MZ326866.1 [NCBI]
CDS location
range 29706 -> 30068
strand +
CDS
ATGTTTTCGCCAGTGGGCAAGATCATTTCCGGGGAGGCCACACGGTCGGTTGTGCTTACCCCGCCATGGTGGGGTAGCCGCCCGATCGGATCGCTTCCAGTGCCTGATTTCAAGATTGAGGGGCACGTCTACCAACGCGATGATGAGGGCAACGATACCCCCATTTACCTGTGCCGCGTGCGCCTTCACTACCGCCCGAACGGCGTTGCGATCGCCACCACTAAGACCGACCGAAACGGGTTCTATCGCTTCGATGACTTGATGCCGGACATTGCGTATTACTACGTGGTGGCATTCGATCCGGACGGCGGCGTGAATCAAAACGCGGTCATCCTCGACAAGCTGTCGACGGTGCCGGCATAA

Genome Context

Genome Context

Tertiary structure

PDB ID
2459a40509130a04f452e1f91d2b43801025fd81dca3c6cd9d3cb7ff0572fb27
ColabFold
Source ColabFold
Method ColabFold
Resolution 0,7082
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Complete genome sequence of Stenotrophomonas maltophilia phage Suso Emilia,Q., Groover,K., Clark,J., Le,T., Liu,M. and Young,R. 2022-04-21 — GenBank