Protein

View in Explore
Genbank accession
ASV42093.1 [GenBank]
Protein name
tail fiber protein
RBP type
TF
Evidence Phold
Probability 1,00
Protein sequence
MSNSKEVFTYLNKSQADGDVVYDIPAFTAPSPYKISFNVDNVTAGSLEVYVKYMAEASYETLLDANGNPRTVDLTSPLTFIADEWVSVKFVPVGVVGTYSIFGYKHH
Physico‐chemical
properties
protein length:107 AA
molecular weight: 11811,10670 Da
isoelectric point:4,70766
aromaticity:0,14019
hydropathy:-0,02897

Domains

Domains [InterPro]

No domain annotations available.

Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Taxonomy

  Name Taxonomy ID Lineage
Phage Vibrio phage JSF13
[NCBI] 		1983596 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Vibrio cholerae
[NCBI] 		666 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Vibrionales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
ASV42093.1 [NCBI]
Genbank nucleotide accession
KY883638.1 [NCBI]
CDS location
range 1650 -> 1973
strand -
CDS
ATGTCTAACTCAAAAGAAGTTTTCACTTACCTTAATAAATCTCAAGCAGATGGTGATGTCGTTTACGATATCCCAGCATTTACTGCACCATCCCCTTATAAGATCAGCTTTAATGTAGATAATGTTACCGCAGGTAGTTTAGAAGTTTATGTTAAATATATGGCAGAAGCCTCTTACGAAACATTATTAGACGCTAATGGTAACCCGCGTACTGTTGATTTAACCTCCCCATTAACTTTCATTGCCGATGAATGGGTTAGTGTAAAATTTGTACCTGTTGGTGTTGTAGGTACCTATAGTATCTTCGGATACAAACACCACTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
41b5d5a9fe0cf834942b78969c8f97ef2c4d5bd4701521c1261830a7524dbd62
ColabFold
Source ColabFold
Method ColabFold
Resolution 0,8305
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50