Protein

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Genbank accession
UCS82855.1 [GenBank]
Protein name
central tail fiber J
RBP type
TF
Evidence Phold
Probability 1,00
TSP
Evidence RBPdetect
Probability 0,90
TF
Evidence RBPdetect2
Probability 0,96
Protein sequence
MGKGGGSASTPTVLPDNLKNKQFLRVVDLIGEGQIEGPVGGLKGIRINDTPVESSTGTVNIKGVTVEWKAGTQSQEPLVGFDDIENEESVGVAVKFNDPVTRTVSDVDVDRIRFTVGVSQLVYTDDQGNQGNTSVNMSLQLFENGSWVTKKVVDISGKTTATYLESHIIDAPATKPFQIRVVRNTADSTSDRLLNGTVWSSYTELTSARLSYPNSAVVGIVIDRSQFAETPTRTYHIRGLMVKIPDNYDPVTRTYTGIWTGNFKIAYTNNPAWIFYDIVTNDRYGMGKRLGSFGVNKFDMYAIAQYCDVNVPDGFGGEEPRFVCNAYITEQRKAYDVLSDLASVFRAMPVWNGLEYTCIQDRPTDKEWTYTNANVIGGKFSRSSSALKARHTAIEVSWINPDNGWKSEVEYVADDELIQRFGYNVSKVTAFGCTSRGQANRVGKWILETEKLETKTIKFSVAMEGLNSMPGDIIEIADNDHAVAKVGGRVVSFSGTRITLDAPVEIATGEVASFSYLSANGRFEKIAISGHPEPDVIILGSVPNGLQKWGVFSISKASLSTQLYRVSTISGPDDGIYSIIAVQHEPQKEAIVDEGANFEGIPTTGASVRVPGIEKLRIASVPDSTLMQSRALWETATINRSITFDVRVLRDGREVSSGNTSEFEYAFNGLEAGTYEVAVRGRDTRGMLGDESSVDMVIGAPAAPSRVDIIEGFLQLTLTPHITAPQTFATQFEFWFSGEIPIANINEIETTATRLGRGTFWVKDALKAGHKYYFYIRSVNEWGKSAFIEAAGTPSIDAGGILDTILDDFLQSNAGQQLTGQIESITDAEIENALANDADIYRRRVVDGQNSASITEIRQVTADTNKAFAEYKQVVDATFGQQQALIETKATTVFDSTGGSALYSVKAGVNYNGNYYDAGMVIGVEASGTTVKSQIGFNADTLIVTSGQNGAKFSPFAIVNGQVIINETIIGNATIGSAKIADYLQSTNWVSNSTGIRIGMRTGTIEINGATAGQGRMAITNNRISVYDQNNVLRVVVGQKV
Physico‐chemical
properties
protein length:1041 AA
molecular weight: 113031,20060 Da
isoelectric point:5,03204
aromaticity:0,08742
hydropathy:-0,19395

Domains

Domains [InterPro]
IPR053171
Unmapped
1–828
IPR053171 IPR015406
DC_0014
STR
1–1041
DC_0014
IPR055385
ATT
85–207
IPR055385 IPR032876 IPR055383 IPR057587
UCS82855.1
1 1041
Architecture
STR
ATT
STR
ATT
STR
ATT
STR
STR 1-84 | ATT 85-207 | STR 208-328 | ATT 329-481 | STR 482-702 | ATT 703-805 | STR 806-1041
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
UCS82855.1
1 1041
Domain Start End Length (AA) Confidence
N-terminal 1 490 490 0,8246
Central domain 491 983 494 0,0990
C-terminal 984 1041 57 0,7586
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-490
Central
491-983
C-terminal
984-1041

Taxonomy

  Name Taxonomy ID Lineage
Phage Yersinia phage vB_YenS_P400
[NCBI] 		2880895 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Yersinia enterocolitica
[NCBI] 		630 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Enterobacterales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
UCS82855.1 [NCBI]
Genbank nucleotide accession
OK042081.1 [NCBI]
CDS location
range 29502 -> 32627
strand +
CDS
ATGGGTAAGGGCGGCGGTTCGGCAAGTACCCCAACGGTATTGCCAGATAACTTAAAGAATAAACAATTCCTGCGCGTGGTTGACTTGATTGGCGAGGGTCAAATTGAGGGGCCTGTCGGTGGATTAAAGGGCATCAGAATCAATGATACTCCCGTGGAATCATCAACTGGCACGGTAAATATCAAAGGTGTAACAGTAGAGTGGAAAGCTGGCACGCAGTCACAAGAGCCACTGGTTGGTTTTGATGATATTGAAAATGAAGAATCCGTTGGGGTAGCGGTTAAATTTAATGACCCAGTTACGCGCACTGTATCTGATGTGGATGTTGACCGCATTCGCTTTACTGTGGGAGTGAGTCAGCTTGTCTATACAGATGACCAAGGAAATCAAGGCAATACATCAGTCAACATGTCATTGCAGTTATTCGAAAATGGCTCTTGGGTTACTAAAAAAGTAGTTGATATTTCGGGAAAGACAACTGCCACTTATCTTGAATCGCATATCATTGACGCGCCAGCAACTAAGCCATTTCAGATTCGAGTTGTACGAAACACGGCCGATAGCACAAGCGATAGATTACTAAACGGAACAGTGTGGTCAAGCTACACGGAGCTTACCAGTGCGCGACTGTCATATCCTAACAGCGCCGTTGTAGGCATTGTCATTGACCGGTCACAATTCGCCGAAACTCCGACACGGACGTATCACATTCGCGGCCTTATGGTTAAGATTCCTGATAATTACGACCCGGTAACAAGAACATATACAGGAATCTGGACGGGTAATTTTAAGATTGCATATACAAATAATCCAGCATGGATTTTCTATGACATCGTGACCAATGACCGCTACGGAATGGGTAAGCGACTTGGTAGCTTTGGCGTTAATAAGTTCGATATGTACGCCATTGCTCAATATTGCGATGTTAATGTCCCTGACGGATTCGGCGGTGAAGAGCCTCGATTTGTCTGTAATGCTTATATTACAGAGCAACGAAAGGCCTATGATGTTCTTTCTGACTTGGCGTCAGTGTTCAGAGCCATGCCTGTCTGGAATGGGTTGGAGTACACTTGCATTCAAGACAGGCCTACGGATAAAGAGTGGACTTATACAAACGCTAACGTCATTGGTGGTAAATTCTCACGCTCATCATCTGCGCTAAAGGCGCGACATACGGCAATAGAAGTATCATGGATTAATCCGGATAATGGCTGGAAATCAGAAGTTGAATACGTTGCAGACGATGAATTAATTCAACGATTTGGCTATAACGTAAGTAAAGTAACTGCATTCGGGTGTACGTCACGCGGTCAGGCTAATCGTGTGGGCAAATGGATTTTAGAAACAGAGAAACTAGAAACCAAGACAATTAAGTTCTCCGTGGCCATGGAGGGATTAAATTCCATGCCGGGTGACATTATCGAGATTGCAGATAATGACCATGCCGTAGCAAAAGTTGGCGGTCGTGTTGTTTCATTTTCTGGCACACGAATTACTTTGGACGCTCCCGTGGAAATTGCTACCGGAGAAGTCGCCTCATTCTCATACTTAAGCGCTAATGGAAGATTTGAGAAAATAGCTATTTCCGGCCACCCAGAACCAGACGTTATTATTCTTGGTTCAGTGCCAAATGGCTTGCAAAAGTGGGGCGTATTCAGCATCTCAAAAGCATCTCTATCAACGCAGCTATATCGAGTTTCTACAATCTCAGGGCCAGACGATGGAATTTATTCAATCATTGCAGTCCAGCACGAACCGCAGAAAGAGGCGATTGTTGATGAGGGCGCTAACTTTGAGGGCATTCCAACAACGGGTGCGTCCGTTCGCGTTCCCGGAATTGAGAAACTACGGATTGCGTCAGTGCCAGACAGTACATTAATGCAGTCTCGTGCATTGTGGGAAACGGCGACAATAAACCGCAGCATTACTTTTGACGTTCGAGTATTGCGCGATGGCCGGGAAGTTAGCTCTGGTAATACCTCAGAATTTGAATATGCATTTAACGGCCTAGAGGCTGGAACGTATGAAGTCGCAGTTCGTGGTCGTGATACGCGCGGGATGCTTGGCGATGAGTCCAGTGTTGACATGGTTATAGGAGCGCCAGCAGCTCCGAGTCGTGTTGATATCATTGAGGGCTTCTTGCAATTAACGCTAACCCCACACATCACTGCGCCGCAGACATTTGCCACTCAATTTGAATTTTGGTTCTCTGGTGAAATCCCGATTGCCAATATCAATGAAATTGAAACAACTGCCACACGATTGGGTCGAGGTACATTTTGGGTTAAAGATGCATTAAAGGCTGGTCATAAATATTATTTCTACATTCGCAGCGTTAACGAGTGGGGGAAATCTGCATTTATAGAAGCGGCTGGAACCCCATCAATAGATGCTGGCGGGATACTTGATACTATCCTTGACGACTTCCTGCAATCAAATGCCGGGCAGCAATTAACCGGGCAAATAGAGTCAATCACTGACGCTGAGATTGAGAACGCCCTCGCTAATGATGCTGATATTTACCGCCGCCGAGTTGTTGACGGACAAAATAGCGCATCCATTACCGAGATTAGGCAGGTTACAGCGGACACTAACAAGGCTTTTGCTGAATACAAGCAAGTTGTTGACGCTACATTTGGGCAGCAGCAAGCATTAATTGAAACCAAAGCCACCACGGTATTTGATTCAACCGGTGGCAGTGCGCTATACAGCGTCAAGGCTGGTGTAAATTATAACGGAAACTATTACGATGCTGGGATGGTTATTGGCGTTGAGGCTTCAGGCACAACAGTTAAATCTCAAATTGGTTTTAATGCTGACACATTGATTGTCACGTCTGGACAAAATGGCGCTAAGTTCTCGCCGTTTGCTATCGTTAATGGTCAGGTTATAATCAATGAAACGATTATTGGTAATGCAACGATTGGTTCAGCAAAAATCGCTGACTACTTGCAATCAACAAACTGGGTATCTAACTCCACCGGAATACGCATTGGCATGAGAACTGGTACAATAGAGATAAATGGGGCTACTGCGGGGCAAGGTAGGATGGCAATCACTAACAATAGAATCAGCGTGTATGACCAGAACAATGTATTGCGCGTAGTTGTTGGGCAGAAAGTCTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
b4defad2ec3c5dca09211ef6996493f00c6f484bca9d97fd12813c70979da277
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,8393
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Properties of two broad host range phages and the first virulent siphovirus of Yersinia enterocolitica isolated from wild animals Hammerl,J.A. and Hertwig,S. 2021-10-21 — GenBank