Protein

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Genbank accession
AIE38349.1 [GenBank]
Protein name
phage structural protein
RBP type
TSP
Evidence DepoScope
Probability 1,00
Protein sequence
MASHAPRDVLGRGCPTVHVHLQRGLLPGRFRADPERVRAAGHRSGNRVYPYILRLGGRRLLSDVHVLVRYSEVETGVEHHMTEKSGFFVSINGDRKYSADDFGRMFDGVISDGIFQNWGRGYQVAKGSGREIIVQSGRAWFKGHWIENDANKVYALTEGATDGDRYDAITLRVDKTPSVRSAGTRVIQGTSGGGVPQPTQTNDTFEVIVAYIRVPRGAKTNADFEVTDCRGRVGAQYAQWAQSVMQPKQITLNNKNDFLNAFNNDPNLKRVITRGNNLGRVMTPAQKAAIRNGTFDGLWLGDYWQYNDNSCKWIIVDFDRWLDYPNGENQHRITVMSDRNLGVDNIGESGWCEYGWNGSKMRRDYSNGMVRFATLTQVFTMSDFRTFPVMEPHGYENTGNAWERTEKDWTWEYPQLTIPSEFEMFGSYLVHNRINGDTHTIGPISRQFSYFRVGNPIPTPGESFWLRDQISKDYFGLYYGDQRRVTWAQWTEKYGVRPIVSIGG
Physico‐chemical
properties
protein length:504 AA
molecular weight: 57381,47730 Da
isoelectric point:8,94894
aromaticity:0,12103
hydropathy:-0,61151

Domains

Domains [InterPro]

No domain annotations available.

Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
AIE38349.1
1 504
Domain Start End Length (AA) Confidence
N-terminal 1 248 248 0,9058
Central domain 249 447 200 0,4190
C-terminal 448 504 56 0,9960
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-248
Central
249-447
C-terminal
448-504

Taxonomy

  Name Taxonomy ID Lineage
Phage Siphovirus contig89
[NCBI] 		1518022 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host No host information

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
AIE38349.1 [NCBI]
Genbank nucleotide accession
KF594184 [NCBI]
CDS location
range 1379 -> 2893
strand +
CDS
ATGGCGTCACATGCCCCTCGAGATGTTCTCGGGCGAGGCTGCCCAACAGTCCATGTACACTTACAACGAGGACTTCTTCCTGGGCGATTTCGTGCAGATCCAGAACGAGTTCGGGCAGCAGGACATCGCTCGGGTAACCGAGTATATCCGTACATCCTCAGACTCGGAGGGCGACGTCTTCTATCCGACGTTCACGTCCTTGTCCGATATTCAGAAGTCGAAACCGGGGTTGAACATCACATGACAGAGAAATCAGGATTCTTCGTCTCCATCAATGGGGACCGGAAGTACTCCGCTGACGACTTCGGCCGCATGTTCGACGGAGTCATCTCGGACGGTATATTCCAGAACTGGGGTCGAGGCTACCAGGTTGCTAAAGGCTCCGGACGAGAGATCATCGTACAGTCTGGTCGCGCCTGGTTCAAGGGACACTGGATTGAGAACGACGCGAACAAGGTCTACGCGCTTACCGAGGGCGCTACGGACGGCGATCGTTACGATGCTATAACCCTCAGGGTCGACAAGACGCCTAGCGTTCGCTCCGCAGGTACCCGTGTTATTCAGGGAACTTCTGGCGGCGGTGTCCCACAGCCTACCCAGACAAATGACACCTTCGAAGTCATCGTCGCCTATATTCGGGTCCCCAGGGGAGCCAAGACGAACGCGGACTTCGAAGTCACGGACTGCCGCGGTAGGGTTGGCGCTCAGTATGCTCAGTGGGCTCAGAGTGTCATGCAGCCCAAGCAGATCACTCTGAACAACAAGAACGATTTCCTCAACGCCTTCAATAACGACCCGAATCTCAAGCGAGTCATTACTCGCGGTAACAACCTGGGCAGGGTCATGACGCCTGCTCAGAAGGCAGCCATCCGGAACGGGACGTTCGACGGCTTGTGGTTGGGGGACTACTGGCAGTACAACGATAACTCCTGCAAGTGGATCATCGTCGACTTCGATCGGTGGCTGGACTACCCGAATGGCGAGAATCAGCACCGAATCACGGTCATGAGCGACCGCAACCTCGGGGTCGACAATATCGGCGAGTCTGGATGGTGCGAATACGGCTGGAACGGCTCCAAGATGCGACGGGACTATTCCAATGGCATGGTGCGCTTCGCCACGCTTACCCAGGTCTTCACCATGTCGGACTTCCGGACGTTCCCCGTTATGGAACCGCACGGTTACGAGAACACCGGAAACGCCTGGGAACGCACGGAGAAGGACTGGACCTGGGAGTATCCGCAACTCACCATTCCGTCTGAGTTCGAGATGTTCGGCTCATATCTTGTGCACAACCGCATCAACGGCGACACCCACACTATCGGCCCCATCTCTCGTCAGTTCTCGTATTTCCGTGTCGGCAACCCGATTCCGACCCCGGGAGAGTCCTTCTGGCTCCGGGATCAGATCTCTAAGGACTACTTCGGCCTGTACTACGGCGATCAGCGTCGAGTCACTTGGGCCCAGTGGACCGAGAAGTACGGGGTGCGCCCAATCGTTTCTATCGGAGGCTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
26af99035211875843a90a6eef097e42ec4e551f29de87ab4deb6ebed155fd6a
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,6978
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Human oral viruses are personal, persistent and gender-consistent Abeles,S.R., Robles-Sikisaka,R., Ly,M., Lum,A.G., Salzman,J., Boehm,T.K. and Pride,D.T. 2014 24646696 GenBank