Protein

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Genbank accession
AUR87892.1 [GenBank]
Protein name
tail fiber protein
RBP type
TF
Evidence Phold
Probability 1,00
TF
Evidence RBPdetect
Probability 0,90
Protein sequence
MLQQLTLLTKTPPTLGAGQMTLSFDAVLEDTLEAAVELSDYPIEVGSISNDHRIKLPVRWTITGAISNNPLKVSLFNRFSGLLGELADSNGALSATAGLMAGWLNSDDTTTRNSDALNALLKLMYEGDPFMVDAGDIQLQNMVIESIRRTKDASNESGLVFVAELREWQEIQSYQEIDQGQTQAETGTETASASSNFLERGKQSIKDAGTNAAAAVTGWFQ
Physico‐chemical
properties
protein length:221 AA
molecular weight: 23877,38150 Da
isoelectric point:4,35906
aromaticity:0,06335
hydropathy:-0,20452

Domains

Domains [InterPro]
DC_0628
STR
8–219
DC_0628
IPR048494
ATT
24–169
IPR048494
AUR87892.1
1 221
Architecture
STR
ATT
STR
STR 8-23 | ATT 24-169 | STR 170-219 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Taxonomy

  Name Taxonomy ID Lineage
Phage Vibrio phage 1.105.O._10N.286.49.B4
[NCBI] 		1881247 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Vibrio cyclitrophicus
[NCBI] 		47951 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Vibrionales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
AUR87892.1 [NCBI]
Genbank nucleotide accession
MG592477.1 [NCBI]
CDS location
range 28671 -> 29336
strand +
CDS
ATGCTACAGCAATTAACACTACTCACAAAAACACCTCCGACACTTGGCGCGGGGCAAATGACCCTATCCTTTGATGCTGTGCTAGAAGATACGCTAGAGGCTGCGGTTGAATTGTCGGACTATCCTATTGAGGTTGGATCGATATCAAACGACCATAGAATCAAGCTTCCTGTAAGATGGACCATTACCGGCGCAATATCTAATAACCCGCTAAAGGTTTCGCTATTCAATCGATTCTCCGGCTTGCTTGGCGAATTAGCCGATAGTAACGGAGCTCTATCTGCTACGGCGGGCTTAATGGCTGGGTGGTTAAATAGTGACGACACGACAACCCGAAACTCTGACGCGCTGAATGCCCTGCTAAAGTTAATGTATGAAGGCGATCCGTTTATGGTTGATGCGGGTGATATTCAATTGCAAAACATGGTCATTGAAAGCATTCGGCGCACAAAAGATGCAAGCAATGAAAGCGGCCTTGTATTTGTGGCTGAGTTGCGAGAATGGCAGGAAATCCAGTCTTACCAAGAAATTGATCAAGGTCAAACTCAAGCGGAAACAGGCACAGAAACAGCGAGCGCTTCTTCTAACTTTCTTGAGCGTGGCAAGCAGTCAATAAAAGATGCGGGAACAAATGCAGCAGCAGCGGTTACGGGGTGGTTTCAATGA

Genome Context

Genome Context

Tertiary structure

PDB ID
543d06b9a83468832b5bc98ca8074f773c32ed089a691e3bdcd14cd93d803f88
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,7460
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
A major lineage of nontailed dsDNA viruses as unrecognized killers of marine bacteria Kauffman,K.M., Hussain,F.A., Yang,J., Arevalo,P., Brown,J.M., Chang,W.K., VanInsberghe,D., Elsherbini,J., Cutler,M.B., Kelly,L. and Polz,M.F. 2018-01-24 — GenBank