Protein

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Genbank accession

XYO05852.1 [GenBank]

Protein name

tail sheath protein

RBP type

TSP

Evidence DepoScope

Probability 1,00

Protein sequence

MADSFVVAPSVQWTERDATLATLSGVARDAASVGEYAWGPVEYPVRVTGGEEGLVQAFWKPTKDLYMDFLVLADFMRYSSSAWVVRVTKPGALNAIVGSTPTIVKNIDELEAYTGAEALMARYPGALGNNVNVFVMSQTEHAAAKADYEAGFRNGLASLWPLIKDKTALGTNEYNVFVFDVSGALGGSAPSEAVDRKKLVIGWPSAEAHPGLLLGTQSGSARITLQWAGSTAPANDAELAQALVAQFKNVPESTRRLNNIKNFAINGTKDFEVEFYTDPGSATWYASAAGTFTANTVTVISVDTYGSLIESWEHISTVEGAKRYDGSAAYYVDTINAGSRFIGCGSAFGTTTPTGIQELRGGSDGSGDANHQPGFDILNNKNYEFLAFVGSSKDIASQQGGIDLNQSRRTSVGFFAPLQAFRDATRPNKMAVLRDWRNNQLFRDNSYFVMVDNWGEVYDKYNGVYRFIPCSGGTAGLWFRSIAAAGIGKSPAFYNRGKYLSYRRMAWTANDDERSELYNQLGINSIVSEKEGIILMGDKTGLSRTSAFSRINTRGIFIEMEVNISSTAKYVLGENNDTFTQASFRNSVEPYLRRKKTNGEILDYRVKADETNNTGQVIAENKFVAGIWIKPQYSINWVYLDFVALRPDMEFSELEGQYGIVTV

Physico‐chemical properties

protein length:	663 AA
molecular weight:	72592,31100 Da
isoelectric point:	5,28309
aromaticity:	0,11614
hydropathy:	-0,23394

Domains

Domains [InterPro]

IPR052042
Unmapped
20–623

IPR052042

G3DSA:3.40.50.11780
STR
27–148

G3DSA:3.40.50.11780 G3DSA:3.40.50.11780 IPR020287

DC_1098
STR
74–360

DC_1098 G3DSA:3.40.50.11780 IPR020287

XYO05852.1

1 663

Architecture

STR

TAS

STR 27-509 | TAS 535-642 |

Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Domains [InterPro]

Domain ID	Category	Cluster	Start	End	Layer	Name	Pref Zone	Confidence	Evidence	Support
IPR052042	Unmapped	-	20	623	InterPro	Tail sheath structural protein	-	-	-	-
G3DSA:3.40.50.11780	STR	G3DSA:3.40.50.11780	27	148	Merged direct domain	G3DSA:3.40.50.11780	Central	Low	Positional only	39 proteins / 39 hits
DC_1098	STR	DC_1098	74	360	Novel HMM	DC_1098	Central	Low	Positional only	21 proteins / 21 hits
G3DSA:3.40.50.11780	STR	G3DSA:3.40.50.11780	360	509	Merged direct domain	G3DSA:3.40.50.11780	Central	Low	Positional only	39 proteins / 39 hits
G3DSA:3.40.50.11780	STR	G3DSA:3.40.50.11780	367	509	Merged direct domain	G3DSA:3.40.50.11780	Central	Low	Positional only	39 proteins / 39 hits
IPR020287	TAS	DC_0666	535	640	InterPro cluster	Tail sheath protein, C-terminal domain	C-terminal	High	Text match	43 proteins / 43 hits
IPR020287	TAS	DC_0666	545	642	InterPro cluster	Tail sheath protein, C-terminal domain	C-terminal	High	Text match	43 proteins / 43 hits

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout

N-terminal

Central

C-terminal

XYO05852.1

1 663

Domain	Start	End	Length (AA)	Confidence
N-terminal	1	126	126	0,7008
Central domain	127	329	204	0,7432
C-terminal	330	663	333	0,3458

Note: Constraints were applied during segmentation.
Fixed 43 C-terminal predictions appearing before Central domain

Legend: N-terminal Central domain C-terminal

3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring

N-terminal
1-126

Central
127-329

C-terminal
330-663

Taxonomy

	Name	Taxonomy ID	Lineage
Phage	Aeromonas phage TSW001 [NCBI]	3434942	Viruses > unclassified bacterial viruses >
Host	Aeromonas salmonicida [NCBI]	645	cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Aeromonadales

Coding sequence (CDS)

Genbank protein accession

XYO05852.1 [NCBI]

Genbank nucleotide accession

PV714136 [NCBI]

CDS location

range 58339 -> 60330
strand +

CDS

ATGGCAGACTCATTTGTAGTTGCCCCATCTGTCCAGTGGACAGAACGGGATGCCACGCTCGCCACTTTGAGTGGCGTTGCAAGAGACGCGGCCAGCGTGGGAGAGTACGCTTGGGGGCCGGTAGAGTACCCAGTGCGTGTTACTGGCGGGGAGGAAGGTCTGGTACAAGCCTTCTGGAAACCGACCAAAGACCTCTACATGGACTTTTTGGTCTTGGCTGATTTCATGCGCTATTCGAGCAGCGCCTGGGTTGTGCGCGTTACCAAACCTGGTGCTCTCAACGCTATCGTCGGAAGTACCCCGACCATTGTCAAGAACATCGACGAACTCGAAGCGTACACCGGCGCCGAAGCGCTGATGGCCCGCTACCCAGGCGCTCTGGGTAACAACGTGAACGTGTTTGTGATGAGCCAGACTGAACACGCCGCCGCGAAAGCTGACTATGAAGCCGGTTTCCGTAATGGCTTGGCGTCTTTGTGGCCTTTGATCAAAGACAAGACCGCCCTGGGAACGAACGAATACAACGTGTTCGTGTTCGACGTGTCCGGCGCTCTTGGCGGCTCTGCTCCTTCAGAAGCCGTCGATCGTAAGAAGTTGGTTATCGGTTGGCCTTCTGCCGAGGCGCATCCAGGATTGCTCCTCGGCACTCAGAGCGGTTCCGCCAGGATCACCCTTCAGTGGGCAGGATCTACCGCTCCCGCAAACGACGCGGAACTGGCCCAGGCCCTGGTCGCCCAGTTCAAGAACGTGCCGGAATCGACACGCCGTCTGAACAACATCAAGAACTTCGCCATCAACGGCACCAAAGATTTTGAAGTCGAGTTCTATACTGATCCTGGTTCGGCCACTTGGTACGCCTCTGCTGCCGGTACGTTCACCGCCAACACCGTGACCGTTATCTCTGTTGACACTTATGGTTCTCTCATCGAAAGTTGGGAACATATTTCAACAGTTGAAGGCGCCAAGCGGTACGATGGTTCTGCGGCCTACTACGTGGACACCATCAACGCGGGTTCGCGTTTCATCGGTTGCGGCAGTGCCTTTGGTACTACCACCCCGACCGGTATCCAGGAGTTGCGCGGCGGTTCTGACGGATCAGGCGATGCCAATCATCAGCCTGGGTTCGACATCCTGAACAACAAGAATTATGAATTCCTGGCGTTCGTGGGTAGCAGCAAAGATATCGCTTCCCAACAAGGTGGTATTGACTTGAACCAAAGTCGTCGCACCAGTGTCGGATTCTTCGCTCCTCTGCAAGCTTTCCGTGATGCGACCCGCCCGAACAAGATGGCGGTTCTTCGTGATTGGCGAAACAACCAGTTGTTCCGTGACAACTCCTATTTTGTCATGGTTGACAACTGGGGTGAAGTTTACGACAAATACAACGGCGTGTATCGCTTTATCCCGTGCAGCGGGGGTACTGCTGGTCTGTGGTTCCGCTCCATCGCGGCAGCCGGAATCGGTAAATCACCGGCGTTCTACAATCGCGGGAAATATCTGTCGTATCGCCGTATGGCGTGGACTGCGAATGACGATGAAAGGTCTGAGCTCTACAACCAGCTCGGTATCAACTCCATCGTCTCTGAAAAGGAAGGCATCATCCTCATGGGTGATAAAACCGGCCTGAGCCGCACTTCTGCTTTCAGTCGGATCAACACGCGTGGCATTTTCATCGAGATGGAGGTTAACATCTCCAGCACCGCGAAATACGTGTTGGGCGAGAACAACGATACTTTCACCCAGGCGTCTTTCCGCAACTCGGTAGAGCCGTATCTGCGCCGCAAGAAAACCAACGGCGAGATCCTGGATTACCGCGTTAAGGCAGACGAGACCAACAACACTGGTCAAGTCATCGCTGAAAACAAATTCGTGGCCGGTATCTGGATCAAACCCCAGTACTCGATCAACTGGGTCTATTTGGACTTCGTTGCGCTGAGACCGGACATGGAGTTCTCTGAACTCGAAGGTCAATACGGCATCGTCACCGTCTAA

Genome Context

Tertiary structure

PDB ID

b3931a5e8846a545e195152d0f44f2314d4109be989c0c1f39fcd1d6a4f080a8

ColabFold

Source ColabFold

Method ColabFold

Resolution 0,7930

Oligomeric State monomer

Download PDB

Model Confidence

Very high
pLDDT > 90

High
90 > pLDDT > 70

Low
70 > pLDDT > 50

Very low
pLDDT < 50

Protein

Domains

Domains [InterPro]

Domains [InterPro]

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

3D Structure with Domain Coloring

Domain Coloring

Taxonomy

Coding sequence (CDS)

Coding sequence (CDS)

Genome Context

Genome Context

Tertiary structure

Predicted Aligned Error (PAE)

Model Confidence