Protein

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Genbank accession
QLF87989.1 [GenBank]
Protein name
hypothetical protein
RBP type
TSP
Evidence DepoScope
Probability 1,00
TSP
Evidence RBPdetect
Probability 0,90
TSP
Evidence RBPdetect2
Probability 0,92
Protein sequence
MTNARDKANIPVLNFQSKGIDDNADATAITINSSEQVGIGTASPGYPLQINSSAQTTLLHLNSTAGTSSAISFANTGSNDSIAISAESDNLKLRTDDGNILFAVAENSEKVRISSAGRLGINDSSPDCMLNIGANSGLSNGDRMRIEDGTYKLDLGVGATSFIGTIGASAIKFSTNSSERMRILSDGKIGIGTSSPSTPLEIASSDQNLLYLNSSHATNAKIKLQGGYHSNLFSEIVESAGSFSIDVDANNQEANSHFRVKVKGTERIRIKSDGKVGIGTSSPSTSLHISSASPQISLTETDQSNKQYRIGSFGGAYAVYDVSATQYRHIIDTNGNHIFNEGSQDCDFRVESNNISDMFVVDGGADRVYINSGSNVSSEYFLIRNNYTRTGMTIKSNTANAHHAIEFHNTNNQVGSINTSGSSVVYNTSSDYRLKENVSYNFDATTRLKQLKPARFNFIADADTTVDGFLAHEVSSVVPEAISGEKDAVDDDGNPKYQGIDQSKLVPLLVKTIQELEARITTLEANNP
Physico‐chemical
properties
protein length:528 AA
molecular weight: 56414,21920 Da
isoelectric point:5,15424
aromaticity:0,06250
hydropathy:-0,39186

Domains

Domains [InterPro]
DC_1386
STR
1–163
DC_1386 DC_1367
DC_1386
STR
129–245
DC_1386 IPR030392
IPR030392
CHP
430–481
IPR030392
QLF87989.1
1 528
Architecture
STR
RBD
STR 1-245 | RBD 246-528
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
QLF87989.1
1 528
Domain Start End Length (AA) Confidence
N-terminal 1 10 10 0,0056
Central domain 11 209 200 0,1106
C-terminal 210 528 318 0,9532
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-10
Central
11-209
C-terminal
210-528

Taxonomy

  Name Taxonomy ID Lineage
Phage Pelagibacter phage Bylgja EXVC010P
[NCBI] 		2736225 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Candidatus Pelagibacter sp
[NCBI] 		2024849 Pseudomonadota > Alphaproteobacteria > Candidatus Pelagibacterales > Candidatus Pelagibacteraceae > Candidatus Pelagibacter >

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
QLF87989.1 [NCBI]
Genbank nucleotide accession
MT375520 [NCBI]
CDS location
range 18029 -> 19615
strand +
CDS
ATGACTAACGCAAGAGATAAAGCAAACATACCAGTATTAAATTTTCAATCTAAAGGTATAGATGATAATGCTGATGCTACTGCTATAACTATTAACTCATCAGAGCAAGTTGGGATTGGAACTGCATCTCCAGGCTATCCATTACAAATTAATAGTTCTGCACAAACAACTTTATTACATTTAAATTCTACAGCAGGAACATCTTCAGCTATATCTTTTGCTAACACAGGCTCTAACGATAGTATCGCTATTAGTGCTGAAAGTGATAATTTAAAATTAAGAACAGATGATGGAAATATTTTATTTGCTGTAGCAGAAAATTCAGAAAAAGTTCGTATCTCATCAGCAGGAAGATTAGGTATCAACGATAGTTCGCCAGATTGTATGCTTAATATAGGTGCTAACTCTGGTTTATCTAATGGCGATAGAATGAGAATAGAAGATGGTACTTACAAATTAGATTTAGGTGTAGGTGCAACTTCTTTTATAGGTACTATTGGTGCTTCTGCTATTAAATTTTCTACAAATTCTAGTGAGAGAATGAGAATTTTATCAGACGGAAAAATTGGTATCGGAACTTCATCGCCATCTACACCTTTAGAAATTGCAAGTAGTGACCAAAATCTTTTATATTTAAATAGTAGTCATGCCACAAATGCTAAAATTAAATTACAAGGTGGTTATCATTCAAATTTATTTTCAGAAATAGTTGAAAGTGCAGGTTCTTTTAGTATTGATGTTGATGCTAATAACCAAGAAGCTAATTCTCATTTTAGAGTTAAAGTAAAAGGTACAGAACGTATCCGTATCAAATCAGACGGAAAAGTTGGTATCGGAACTTCATCTCCATCAACATCACTTCACATAAGTAGTGCTTCTCCACAAATATCTTTAACAGAAACAGACCAAAGTAATAAACAATATAGAATTGGTTCTTTTGGTGGTGCTTACGCAGTTTATGATGTTTCAGCTACTCAATACAGACATATTATAGATACCAATGGTAATCATATTTTTAATGAAGGAAGTCAAGATTGTGATTTCAGAGTTGAGAGCAATAATATTTCAGATATGTTTGTTGTTGATGGAGGTGCTGACAGAGTATATATAAATTCTGGTTCAAATGTAAGTAGTGAATATTTTTTAATTAGAAATAATTATACTAGAACTGGCATGACAATAAAAAGTAATACTGCTAATGCTCATCATGCTATAGAATTTCATAATACAAATAATCAAGTTGGTTCAATAAATACTTCTGGTTCATCAGTAGTTTATAACACTTCATCAGATTACAGATTAAAAGAAAATGTATCTTATAATTTTGATGCAACAACAAGATTAAAACAATTAAAACCTGCAAGATTTAATTTTATAGCAGATGCAGATACAACAGTAGATGGTTTCTTAGCACATGAAGTATCAAGTGTAGTACCAGAAGCAATCTCTGGAGAAAAAGATGCAGTAGATGATGATGGTAATCCTAAATATCAAGGTATCGACCAATCTAAATTAGTACCTTTATTGGTCAAAACAATTCAAGAATTAGAAGCTAGAATAACAACACTAGAAGCTAATAACCCATAA

Genome Context

Genome Context

Tertiary structure

PDB ID
03329383200396895d59dec343f6d6146773246bb4b3ab8395c7b1b605508fa9
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,7661
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50