Protein

View in Explore
Genbank accession
XUE03884.1 [GenBank]
Protein name
non-contractile tail tubular protein
RBP type
TSP
Evidence DepoScope
Probability 1,00
Protein sequence
MALISQSIKNLKGGISQQPDILRYPDQGSRQVNGWSSETEGLQKRPPMVFLKTLGGSGDLGQAPYIHLINRDENEQYYAVFTGTGIRVFDLAGNEKQVRYPTDGSAYITTSNPRNDLRMVTVADYTFIVNRNVKVTRNTNSVNLPGFNPNQDALINVRGGQYGRTLQIIINGYGAQASYQIPDGSQPAHVNNTDAQWLAEELARQLRANIPTWTFNVGQGFIHIIAPANDSIRSLVTKDGYADQLINPVTHYAQSFSKLPPNAPDGYTVKIVGDASKSADQYYVRYDATRKVWVETLGWNVNNQLLYETMPHALVRAADGNFEFRWLEWSPKTCGDDDTNPWPSFMDSTINDVFFFRNRLGFLSGENIILSRTAKYFNFYPASIANLSDDDPIDVAVSTNRIAILKYAVPFSEELLIWSDEAQFVLTASGTLTSKSVELNLTTQFDVQDRARPFGIGRNVYFASPRSSFTSIHRYYAVQDVSSVKNAEDITAHVPNYIPNGVFSICGSGTENFCSVLSRGDPSKIFMYKFLYLNEELRQQSWSHWDFGENVQVLACQSINSDMYVILRNEFNTFLAKISFTKNAIDLRGEPYRAFMDMKIRYTIPSGTYNDDTYTTSVHLPTIYGANFGRGKITVLEPDGKITVFEQPTAGWHSDPWLRLSGNLEGRMVYIGFNINFIYEFSKFLIKQTADDGSTSTEDIGRLQLRRAWVNYEDSGTFDIYVENQSSNWKYTMAGARLGSNALRAGRLNLGTGQYRFPVVGNAKFNTVSILSDETTPLNIIGCGWEGNYLRRSSGI
Physico‐chemical
properties
protein length:796 AA
molecular weight: 89445,07130 Da
isoelectric point:5,91492
aromaticity:0,12060
hydropathy:-0,35641

Domains

Domains [InterPro]
IPR058003
TTP
1–796
IPR058003
XUE03884.1
1 796
Architecture
TTP
TTP 1-796
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
XUE03884.1
1 796
Domain Start End Length (AA) Confidence
N-terminal 1 139 139 0,9927
Central domain 140 350 212 0,2272
C-terminal 351 796 445 0,1965
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-139
Central
140-350
C-terminal
351-796

Taxonomy

  Name Taxonomy ID Lineage
Phage Yersinia phage vB_Yep_15
[NCBI] 		3421739 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Yersinia enterocolitica
[NCBI] 		630 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Enterobacterales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
XUE03884.1 [NCBI]
Genbank nucleotide accession
PV596791 [NCBI]
CDS location
range 23981 -> 26371
strand +
CDS
ATGGCACTCATTAGCCAATCAATCAAGAACTTGAAGGGTGGTATCAGTCAACAGCCTGACATCCTTCGTTATCCAGACCAAGGGTCACGCCAAGTTAACGGTTGGTCTTCGGAGACCGAGGGCCTCCAAAAGCGTCCACCTATGGTTTTCCTTAAGACACTGGGAGGTAGTGGCGACTTAGGGCAAGCACCTTACATTCACCTGATAAACCGAGATGAGAACGAGCAGTATTATGCTGTGTTTACCGGAACAGGAATCCGTGTGTTTGACCTTGCTGGTAACGAAAAACAGGTACGATACCCTACAGATGGTTCCGCATACATTACCACTTCGAACCCAAGGAATGACTTGAGGATGGTAACCGTGGCTGACTATACGTTCATCGTTAACAGAAACGTAAAGGTGACTCGTAACACCAACTCAGTAAATCTTCCTGGGTTTAACCCTAATCAGGACGCTCTGATTAATGTTCGTGGAGGACAGTACGGTAGAACTCTCCAGATTATAATAAATGGTTATGGGGCACAGGCAAGCTATCAGATTCCTGATGGTTCGCAACCAGCACACGTCAATAACACAGATGCTCAATGGCTTGCTGAGGAACTTGCTAGACAACTTCGTGCGAATATACCAACATGGACATTTAACGTTGGTCAAGGCTTTATTCATATTATTGCTCCAGCTAATGATTCAATTCGCTCCCTAGTGACCAAGGATGGTTATGCTGACCAGTTGATTAATCCTGTTACTCACTACGCTCAGTCGTTCTCTAAGTTGCCACCTAATGCTCCTGATGGGTACACGGTGAAAATCGTAGGGGATGCTTCCAAGTCTGCTGACCAGTACTACGTTCGCTATGACGCTACACGTAAAGTCTGGGTTGAAACATTAGGCTGGAATGTTAACAATCAGCTTCTGTATGAAACGATGCCTCACGCGTTGGTACGCGCTGCTGACGGTAACTTTGAGTTCAGGTGGCTTGAGTGGAGTCCTAAAACCTGTGGTGACGACGACACAAACCCGTGGCCTTCCTTCATGGATTCCACAATCAACGATGTGTTCTTCTTCCGTAACCGTTTAGGCTTCCTTAGCGGAGAGAATATCATCTTGAGTCGAACCGCTAAGTACTTCAACTTCTACCCAGCGTCAATCGCAAACTTGAGTGATGATGACCCAATCGACGTAGCTGTAAGTACCAACCGAATCGCAATCCTTAAGTATGCAGTTCCGTTCTCAGAAGAGTTACTCATATGGTCCGATGAAGCACAATTCGTCCTGACTGCTTCTGGTACTCTCACGTCGAAGTCAGTTGAGTTGAACCTGACGACACAGTTTGATGTACAGGACCGAGCGAGACCTTTTGGGATTGGACGTAATGTCTACTTTGCCAGCCCGAGGTCCAGCTTCACGTCCATCCACAGATATTATGCTGTGCAGGATGTAAGTTCCGTTAAGAACGCTGAGGACATTACAGCACACGTTCCTAACTACATCCCTAATGGTGTGTTTAGTATTTGCGGTAGTGGTACGGAAAACTTCTGTTCGGTACTATCTCGCGGGGACCCTAGCAAAATCTTCATGTACAAATTCCTGTACCTGAACGAAGAGCTAAGGCAACAGTCGTGGTCTCATTGGGACTTTGGGGAAAACGTGCAGGTTCTAGCTTGCCAGAGTATCAACTCAGATATGTATGTTATTCTTCGCAATGAGTTCAATACGTTCCTAGCTAAAATCTCTTTCACTAAGAACGCCATTGACTTACGAGGCGAGCCTTACCGTGCCTTTATGGACATGAAGATTCGCTACACGATTCCTAGCGGCACATACAACGATGACACCTACACTACCTCTGTTCACCTGCCAACAATCTATGGTGCAAACTTCGGGAGAGGTAAAATAACTGTATTGGAGCCTGACGGTAAGATAACTGTGTTTGAGCAACCTACGGCTGGGTGGCACAGTGACCCTTGGCTGAGACTTAGTGGTAACTTAGAGGGACGTATGGTGTACATTGGGTTCAACATTAACTTCATCTATGAGTTCTCTAAGTTCCTCATCAAGCAAACTGCCGACGATGGGTCTACCTCAACAGAAGACATTGGTCGCTTACAGTTACGCCGAGCGTGGGTTAACTACGAGGATTCTGGAACGTTCGACATTTATGTTGAGAACCAATCGTCCAACTGGAAGTACACAATGGCTGGTGCCCGATTAGGCTCTAACGCTTTGAGGGCCGGTAGACTGAACTTAGGGACCGGACAATACCGATTCCCTGTGGTGGGCAACGCCAAGTTCAATACCGTGTCCATCTTGTCTGATGAGACTACCCCGTTGAACATCATTGGGTGTGGCTGGGAAGGTAACTACTTACGGAGAAGTTCCGGTATTTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
830981b3cf8bf3cc659b778417c6cc0b559727b68d16ad07932cd17603aa4154
ColabFold
Source ColabFold
Method ColabFold
Resolution 0,3322
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50