Protein

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Genbank accession
YP_009779227.1 [GenBank]
Protein name
tail fiber protein
RBP type
TF
Evidence UniProt/TrEMBL
Probability 1,00
TF
Evidence GenBank
Probability 1,00
TSP
Evidence DepoScope
Probability 1,00
TSP
Evidence RBPdetect
Probability 0,87
TSP
Evidence RBPdetect2
Probability 0,58
Protein sequence
MSLTRLKNIITSRTGRIIYVNPDDFDASDAIDNRGNSALRPFKSIQRAFLEVARFSYRVGLSNDEFDAFSIMLYPAEYIIDNRPGEVLYTNVPPIDENSNLDLTSPNNVLHKYNSVEGGVIVPRGCSLVGTDLRRTKIIPKYIPYPTVYAAKGINTEDQVPSRTAIFKVTGGTYFWQFSFFDGAEEGVYFKPDSTETLSPKYSHHRITCFEFADGLNNLSTLITNGTVPNADYTAVPNILERTDLDIYYQKVSKAFATIPDTSGDPANDQIQARVEENRIVGPISDEYRVLQITRNGQTATAVTVDEFDNPRDHGFSVGVNINVSGVTGSTGPSSEVDASTFNGSFIVTSTPTGSTFTYQLSSVPTGNAVGSNITVKTEIDTVDSASPYAFNLSLRSVWGMNGMHADGSKATGFKSMVVAQFTGLSLQKDDRAFVRYNASTGNYDAAVAGDGAHLDGFAEYRKGWAHEHIKCSNDAFIQAVSVFAVGYGTHFTALSGADMSITNSNSNFGNTALRSAGFKAKSFSKDKAGAVTHIIPPKALNVISTTATGTSGASTITLANDGSINGVIQGMTVNGSNIAPGATVISFNVNTRVITLSATNTGTVNNNIIFGEETSVNWVNVDIQRTKVVNAALAGSGGTPGSRLYLYGYTTEASPPTTKVQGYAVGARQDGTGVNAVPDKLNILLVANGATSATVQTAKISPYGPAVSSIAAGVAGSPIQYDSSTYTINGVAGSVGGWYLNVDATDNEIYTTLSTNTQYNNVNFTPSAFLKRIPDPRDLQDRTYRVRLVIDKDKTNPLPRDPLSGYVMQPLNSDTTNYNLQRAFYIYDIEIVQAFERGVSDGIFYLTLLCASISPSTSNFNDRKFSQNVNEVYPTFDRDNPLADPDAAISVADNETIGLVNSTDGASPTPNKDPKRSITKEGVQFLLTDTGWTQPGTTPNYDSVNKRLSNVELTARAGDEETRKINIRQNNDGTVAPIPVEFRRHSIMRSGNHTFEYLGFGPGNYSTAFPQTQVETLSADQIKFSQSIKEEAGVAFYSGLNSNGDLFIGNQIINPVTGQITNEDIAQLNVIGEENTTIETFSELVLTDKLTVIGGASNQLESIFAGPVTFQGLTTFTNNIQAKKISYYNQDGTVIKQTLLAPEDANGQPSFANITGYTTPADGDLVYNINWSPGKSLGWIYYGGVWKEFGLTDTGDIDIATFNNEQHMGIGTAAVTGFRVGILGNAKVDGDLVVTGRGGVGADKYITKTYTGDGTTLTFAVTTYGGGIQHSDDSLLVSLNGVVQIAGTNYTVDANGANVVFSAGDAPLSTDTIHILELPI
Physico‐chemical
properties
protein length:1321 AA
molecular weight: 141755,43420 Da
isoelectric point:4,89358
aromaticity:0,09160
hydropathy:-0,23104

Domains

Domains [InterPro]

No domain annotations available.

Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
YP_009779227.1
1 1321
Domain Start End Length (AA) Confidence
N-terminal 1 81 81 0,9305
Central domain 82 310 230 0,9670
C-terminal 311 1321 1010 0,1464
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-81
Central
82-310
C-terminal
311-1321

Taxonomy

  Name Taxonomy ID Lineage
Phage Cyanophage S-RIM12 isolate RW_06_0310
[NCBI] 		2790659 Uroviricota > Caudoviricetes > Pantevenvirales > Brizovirus > Brizovirus rhodeisland06
Host Synechococcus
[NCBI] 		1129 cellular organisms > Bacteria > Bacillati > Cyanobacteriota/Melainabacteria group > Cyanobacteriota > Cyanophyceae

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
YP_009779227.1 [NCBI]
Genbank nucleotide accession
NC_047716.1 [NCBI]
CDS location
range 23298 -> 27263
strand +
CDS
ATGTCTCTAACTAGACTTAAGAATATTATTACTTCGAGGACAGGGCGTATTATTTACGTCAACCCCGATGATTTTGATGCTTCTGATGCTATCGATAACAGGGGTAACTCTGCATTGAGACCCTTCAAGTCTATTCAGAGAGCATTTCTAGAGGTTGCTAGATTTTCGTATCGAGTAGGTTTGTCGAACGACGAATTTGACGCCTTCTCGATCATGCTGTATCCAGCAGAATATATCATTGACAATCGTCCAGGTGAAGTATTATATACGAATGTTCCTCCTATTGATGAGAACTCCAATCTTGATTTAACATCACCTAACAATGTGTTGCATAAGTACAACTCTGTTGAAGGTGGAGTTATCGTTCCTAGAGGTTGTTCTCTTGTAGGTACTGACCTTCGTCGTACAAAAATTATTCCTAAGTATATTCCATATCCTACAGTGTATGCTGCAAAGGGTATTAATACAGAAGATCAAGTACCTTCTAGAACAGCAATCTTTAAGGTGACTGGTGGTACATATTTCTGGCAGTTCTCATTCTTTGATGGTGCTGAAGAAGGTGTATACTTCAAACCTGATAGTACAGAAACGCTTTCTCCAAAGTATTCTCATCATAGAATTACTTGTTTCGAGTTTGCAGATGGTCTGAATAATCTATCTACATTAATTACTAATGGTACAGTTCCTAACGCAGATTATACTGCCGTACCTAATATTCTTGAGAGAACTGACTTAGATATCTACTATCAGAAAGTATCTAAAGCATTTGCTACTATTCCTGATACATCTGGAGATCCTGCTAATGACCAAATTCAGGCAAGGGTAGAAGAAAATAGAATCGTTGGTCCTATTTCTGATGAATATAGAGTTCTTCAGATTACAAGAAACGGTCAGACAGCAACAGCAGTAACGGTTGATGAGTTTGATAACCCTAGAGACCATGGATTCTCTGTTGGTGTTAACATTAATGTTAGTGGTGTTACTGGGTCTACAGGACCTTCATCTGAGGTTGATGCTTCAACATTCAATGGTTCTTTCATTGTTACATCAACACCAACAGGTAGTACATTCACATATCAGTTATCTTCAGTCCCAACGGGTAATGCTGTAGGTTCTAATATTACAGTTAAGACTGAGATTGATACTGTTGACTCTGCATCTCCTTATGCGTTTAACTTGTCACTGAGAAGTGTCTGGGGCATGAATGGTATGCACGCAGATGGCAGCAAGGCAACTGGTTTCAAATCGATGGTTGTTGCACAGTTTACAGGTCTATCTCTTCAGAAAGATGATAGAGCATTCGTAAGATATAATGCTTCTACTGGTAACTATGATGCAGCAGTTGCTGGTGATGGTGCTCACTTAGATGGTTTTGCTGAGTATCGTAAGGGTTGGGCACACGAGCATATTAAGTGTAGTAATGACGCATTCATTCAGGCAGTTTCTGTGTTTGCTGTTGGATACGGCACACACTTTACAGCACTTAGTGGTGCTGACATGTCGATTACCAACTCTAACAGTAACTTTGGAAACACTGCTTTAAGATCTGCTGGATTTAAGGCAAAATCATTCTCTAAAGATAAAGCAGGAGCAGTTACACATATTATTCCCCCTAAGGCATTGAATGTTATTTCGACAACTGCTACGGGTACAAGTGGTGCTTCTACTATCACTCTTGCTAATGATGGTTCTATCAATGGTGTCATTCAAGGTATGACCGTAAACGGAAGTAATATTGCACCAGGTGCAACTGTTATTTCTTTCAATGTAAATACCAGAGTTATAACTCTATCTGCGACTAATACAGGTACAGTTAATAACAATATTATCTTTGGTGAAGAAACTTCAGTTAACTGGGTAAACGTTGATATTCAACGCACAAAGGTTGTTAATGCTGCTCTCGCAGGTTCTGGTGGAACTCCTGGTAGTAGATTATATCTTTATGGTTACACGACTGAAGCATCACCGCCAACAACAAAGGTTCAGGGTTATGCTGTAGGTGCTCGCCAAGATGGTACGGGTGTTAATGCAGTTCCTGATAAGTTAAATATTCTTTTGGTTGCTAATGGAGCAACTAGTGCTACTGTTCAAACTGCAAAAATTTCACCATATGGTCCTGCAGTCTCTAGTATTGCTGCTGGTGTAGCAGGTTCGCCTATTCAATATGATAGTTCTACATATACAATTAATGGTGTTGCTGGATCAGTTGGTGGATGGTATTTGAATGTTGATGCAACTGATAATGAAATCTACACAACATTATCTACAAATACACAGTACAATAATGTTAACTTTACTCCTAGTGCATTCTTAAAGAGAATTCCTGACCCTCGTGATTTACAAGATAGAACCTATCGTGTTCGTCTTGTAATTGATAAGGATAAGACTAATCCTCTTCCTCGCGATCCCCTTAGCGGTTATGTTATGCAACCGTTGAACAGTGATACAACTAACTACAATCTCCAGAGAGCATTTTATATCTATGATATCGAGATTGTCCAAGCATTTGAACGAGGCGTTTCTGATGGAATCTTCTACCTTACCCTGCTTTGTGCATCTATTTCACCTTCAACTTCTAACTTTAACGACAGGAAGTTCTCTCAAAACGTCAACGAAGTCTATCCTACGTTTGACAGAGACAACCCTCTTGCTGACCCTGATGCTGCGATATCCGTCGCTGACAATGAAACTATCGGTCTAGTAAATTCAACCGATGGTGCATCACCTACACCTAACAAAGACCCTAAGCGTTCTATTACAAAAGAAGGAGTTCAATTCTTACTAACTGATACAGGTTGGACACAACCAGGAACAACACCCAACTATGATAGTGTCAATAAGCGCCTTAGCAATGTAGAACTTACTGCTCGTGCTGGCGATGAAGAAACCAGGAAGATTAATATCCGACAGAATAATGATGGCACTGTTGCTCCTATTCCTGTTGAGTTTAGACGCCACTCTATTATGAGATCTGGTAACCATACCTTTGAGTATCTTGGTTTCGGTCCTGGTAACTATTCAACTGCATTCCCTCAGACTCAAGTAGAGACGCTATCTGCTGACCAGATTAAGTTCTCTCAGTCTATTAAAGAGGAAGCAGGTGTTGCATTCTATTCAGGTCTAAACTCTAATGGTGACTTGTTCATTGGTAACCAGATTATTAACCCTGTTACTGGTCAGATTACGAACGAAGATATCGCACAGTTAAATGTTATCGGTGAAGAGAATACAACGATTGAAACATTCTCTGAGTTGGTTCTTACTGATAAACTCACCGTTATTGGTGGTGCATCTAACCAGTTAGAATCAATCTTTGCTGGTCCTGTTACATTCCAAGGACTTACAACATTCACAAATAATATTCAAGCGAAGAAGATTTCTTATTACAACCAAGATGGTACTGTAATTAAGCAGACTCTTCTCGCACCTGAGGATGCTAATGGTCAACCTAGTTTTGCCAATATCACGGGTTATACTACACCTGCCGATGGTGACCTTGTTTATAATATTAACTGGTCACCTGGTAAATCTTTAGGTTGGATCTACTATGGTGGTGTTTGGAAAGAGTTTGGTCTCACAGATACTGGAGATATCGATATTGCCACATTTAATAATGAGCAGCATATGGGTATTGGTACTGCTGCTGTTACTGGATTTAGAGTTGGTATCTTAGGTAATGCTAAAGTTGATGGAGACTTAGTTGTTACTGGTAGAGGTGGTGTTGGTGCTGATAAGTATATTACCAAAACATATACTGGAGACGGCACAACTCTTACATTTGCAGTTACTACCTATGGCGGTGGTATTCAGCACTCTGATGATTCCCTCTTAGTATCACTGAATGGTGTTGTGCAGATTGCAGGTACAAACTACACAGTTGATGCTAACGGTGCTAATGTTGTATTCAGTGCTGGTGATGCTCCATTATCTACTGATACTATTCACATTTTAGAACTGCCTATCTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
b380497ff6b2b21b80ef0480de73904d356d6f6a6a4d498228ae86c23fc1810b
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,3836
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50