Protein

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Genbank accession
XCX10941.1 [GenBank]
Protein name
hypothetical protein
RBP type
TSP
Evidence RBPdetect
Probability 0,87
Protein sequence
MAIPSFLNFLEESKQLDEAFNSSPYELTFGKKNAGDIFFTFVDEDEKEFRIQFYTPQGLGKNVRQVFIGQKRGSTYPDAIGRFKNPMRVIASMIEATKQFMATPLGKTIDGFAINFSKKALERGVTLLPKIIRQSGLKQKLNVMDLTYTPIPDRAFVWVVRKGKDPAQVFDGPKMKGVTWDDPDKVGDVPVQNNTPDVGVVAGSSEIEVNRDDNGWKLTKASRTQPMLVWSGKERGRTITANIAPHADIPGVYAGSIMNEKRVRAQSPEALARQLGLPQIPMNILNDFTNQSSIFWKEMTGDSGKIDMQTLPKTGSVDDLRNQGYIARLLGIVDTYAPQQVGMYAGEKLTRIGAGKYRTSGGLDIQVYFWGIVNGKLSVEVVSDLSGHDQLMLEGDVKNAAFEIVSAISRAADSQFNGEVECRVVLVNGAPYPIQKVSRSQGYSYVDCGSFVLKVSDALLERFTVGKAVELDLMREFPRTTFPVRYDWYGKTELVVKASDGKTIFGSINTNASDKDAVITANLKAPSNGTFFGETVHGFSIRWAVNFPETGKYAGTSMITNVTYYHDKGKVAFTPIISQKGRTLNNPKTYELPLNKDLVQSVIDEISSKMEYLSRNLQQLKSQTYNPNQVFLNDITITDKGEVIWNDYNLSDGKVTQIMLSMISAENKRLEKVTNKPDITLPKKQAEVVEFINRMIDIDLGPYLREPKKRDVVLFDSSELSINQLNNIERLGRETGKWSLQPNGGMGHALFLNVW
Physico‐chemical
properties
protein length:755 AA
molecular weight: 84213,04960 Da
isoelectric point:8,65290
aromaticity:0,09139
hydropathy:-0,34596

Domains

Domains [InterPro]
DC_0099
STR
1–719
DC_0099
Coil
Unmapped
603–623
Coil
XCX10941.1
1 755
Architecture
STR
STR 1-719 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
XCX10941.1
1 755
Domain Start End Length (AA) Confidence
N-terminal 1 29 29 0,9476
Central domain 30 744 716 0,3895
C-terminal 745 755 10 0,1880
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-29
Central
30-744
C-terminal
745-755

Taxonomy

  Name Taxonomy ID Lineage
Phage Salmonella phage vB_SalA_KFSST3
[NCBI] 		3234038 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Salmonella typhimurium
[NCBI] 		90371 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Enterobacterales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
XCX10941.1 [NCBI]
Genbank nucleotide accession
PP994976 [NCBI]
CDS location
range 44297 -> 46564
strand -
CDS
ATGGCCATCCCATCTTTCTTGAACTTTCTTGAAGAGTCTAAACAATTAGACGAAGCGTTTAACTCATCCCCGTATGAATTGACATTCGGCAAGAAGAACGCTGGTGACATTTTCTTCACATTTGTTGATGAAGACGAAAAAGAATTCCGTATTCAATTCTATACCCCACAAGGTCTAGGCAAGAATGTTCGCCAAGTCTTTATCGGTCAGAAGCGTGGTTCCACATATCCCGATGCCATCGGTCGTTTCAAGAATCCGATGCGTGTTATCGCATCCATGATTGAAGCAACAAAGCAATTCATGGCGACGCCTTTGGGGAAAACCATTGACGGCTTTGCAATTAACTTCTCCAAGAAAGCATTGGAGCGTGGTGTTACCCTCCTGCCGAAGATTATCCGTCAGTCCGGCCTGAAGCAAAAGCTCAATGTCATGGACCTGACGTATACCCCTATCCCTGATCGTGCATTCGTATGGGTTGTGCGTAAAGGCAAGGATCCTGCTCAGGTATTCGATGGTCCGAAAATGAAAGGTGTCACATGGGATGATCCGGACAAAGTCGGTGACGTCCCGGTTCAGAACAATACTCCGGATGTGGGAGTTGTGGCTGGTTCTTCTGAAATCGAAGTCAACCGCGATGACAACGGTTGGAAACTCACCAAAGCTAGTCGTACTCAGCCTATGCTGGTCTGGTCTGGTAAAGAACGTGGGCGGACTATTACCGCCAATATCGCACCTCACGCGGATATACCTGGGGTGTATGCTGGTAGTATCATGAACGAGAAACGGGTCCGCGCTCAATCCCCAGAAGCTCTTGCACGTCAACTGGGATTACCGCAGATTCCTATGAATATTCTGAATGATTTCACCAATCAGTCGTCCATCTTCTGGAAAGAGATGACGGGGGATTCTGGAAAAATAGACATGCAGACTTTGCCAAAAACAGGATCTGTGGATGACTTACGAAATCAGGGTTATATTGCTCGCCTTCTGGGGATTGTAGACACATATGCTCCACAACAGGTCGGTATGTATGCAGGTGAGAAACTAACACGAATCGGCGCGGGCAAATATCGTACTTCGGGTGGTCTGGACATTCAGGTTTATTTCTGGGGAATTGTCAACGGAAAACTTTCTGTAGAAGTAGTATCAGATTTGTCTGGTCATGACCAACTTATGCTGGAAGGAGACGTGAAAAACGCCGCTTTTGAAATTGTCAGTGCGATATCCCGTGCTGCTGATTCTCAGTTCAACGGTGAAGTGGAATGTCGTGTTGTTCTGGTCAACGGTGCCCCATACCCGATTCAAAAGGTTTCCCGTTCCCAGGGTTATTCCTATGTGGATTGCGGTTCGTTTGTTCTGAAAGTTTCTGATGCGCTGCTGGAACGCTTTACTGTCGGCAAGGCGGTAGAATTAGACCTCATGCGTGAATTCCCTCGTACGACCTTCCCGGTTCGTTATGACTGGTATGGCAAAACTGAACTTGTTGTAAAGGCCAGCGATGGTAAGACCATATTCGGTAGCATCAATACCAACGCCAGCGATAAAGACGCTGTCATCACCGCTAACCTGAAAGCGCCTTCCAACGGTACTTTCTTTGGTGAAACGGTTCACGGTTTCTCCATTCGGTGGGCTGTCAATTTCCCCGAAACGGGAAAATATGCCGGTACTTCTATGATAACCAACGTAACCTATTATCATGACAAAGGCAAAGTTGCATTCACCCCAATTATCTCCCAGAAAGGGCGTACCCTGAACAATCCGAAGACCTATGAACTCCCTTTGAACAAAGATTTGGTCCAGAGTGTGATTGATGAGATTTCATCAAAAATGGAATATCTTTCCAGAAACCTCCAACAGTTGAAAAGTCAGACATACAACCCAAACCAGGTTTTCTTGAATGATATAACCATCACGGATAAAGGTGAAGTGATTTGGAACGATTACAACTTGTCTGACGGCAAAGTTACACAAATTATGCTGTCCATGATAAGCGCAGAAAATAAACGCTTGGAGAAAGTGACAAACAAGCCGGATATCACATTACCAAAGAAACAAGCCGAAGTAGTAGAATTTATAAACCGGATGATTGATATTGATCTCGGACCTTATTTGAGAGAACCCAAAAAACGTGATGTGGTATTATTTGACTCTTCTGAATTGTCGATAAACCAACTCAACAACATAGAACGCCTGGGAAGAGAAACAGGAAAATGGTCTCTTCAGCCAAACGGTGGTATGGGCCATGCACTATTTCTGAATGTTTGGTGA

Genome Context

Genome Context

Tertiary structure

PDB ID
9882d2aa57a3e6bd9b8c491f1d48ff5a82f8dad9f1dfcebc147413cfca89324a
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,5316
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Isolation, characterization, and application of a novel, lytic phage vB_SalA_KFSST3 with depolymerase for the control of Salmonella and its biofilm on cantaloupe under cold temperature Kim,S.H., Lee,H. and Park,M.K. 2023 37689855 GenBank