Protein

View in Explore

Genbank accession

QLF85889.1 [GenBank]

Protein name

endolysin tail fiber

RBP type

Evidence GenBank

Probability 1,00

Protein sequence

MLEAAKNRKDDSLMNINTQYLVTDPDRLAVIGPNWMDPTEITFHNTYNDASASAEVRNVRNNSKGTSFHTAVDDFEVQQVVPFDRNAWHAGDGTYGRGNRHSIGVEICYSMSGGERYRKAELNAIEHISDLMVRFNIPISKVKTHQERNGKYCPHRMLDEGRVGWFKAECERRANEKRNGGGGTPTPEPKPVPKPDPAPKPPSGDYDSSWFTKETGTFVTNTAIKLRTAPFTSAGVIATLPAGSTINYNGFGIEYDGYVWIRQPRSNGYGYLATGESKGGKRVNYWGTFK

Physico‐chemical properties

protein length:	290 AA
molecular weight:	32334,64180 Da
isoelectric point:	8,81304
aromaticity:	0,10345
hydropathy:	-0,76000

Domains

Domains [InterPro]

G3DSA:3.40.80.10:FF:000007
Unmapped
14–171

G3DSA:3.40.80.10:FF:000007 G3DSA:2.30.30.40

IPR002502
STR
23–164

IPR002502 IPR003646

IPR036505
STR
30–179

IPR036505 IPR003646

IPR036505
STR
34–170

IPR036505

IPR002502
STR
35–155

IPR002502

IPR051206
Unmapped
36–231

IPR051206

IPR002502
STR
38–157

IPR002502

IPR036505
STR
40–160

IPR036505

QLF85889.1

1 290

Architecture

STR

RBD

STR

RBD

STR 23-179 | RBD 198-212 | STR 213-280 | RBD 281-290

Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Domains [InterPro]

Domain ID	Category	Cluster	Start	End	Layer	Name	Pref Zone	Confidence	Evidence	Support
G3DSA:3.40.80.10:FF:000007	Unmapped	-	14	171	FunFam	N-acetylmuramoyl-L-alanine amidase XlyA	-	-	-	-
IPR002502	STR	DC_0013	23	164	InterPro cluster	N-acetylmuramoyl-L-alanine amidase domain	Central	Low	Positional only	8 proteins / 25 hits
IPR036505	STR	IPR036505	30	179	Merged direct domain	N-acetylmuramoyl-L-alanine amidase/PGRP domain superfamily	Central	Low	Positional only	8 proteins / 8 hits
IPR036505	STR	IPR036505	34	170	Merged direct domain	N-acetylmuramoyl-L-alanine amidase/PGRP domain superfamily	Central	Low	Positional only	8 proteins / 8 hits
IPR002502	STR	DC_0013	35	155	InterPro cluster	N-acetylmuramoyl-L-alanine amidase domain	Central	Low	Positional only	8 proteins / 25 hits
IPR051206	Unmapped	-	36	231	InterPro	N-acetylmuramoyl-L-alanine amidase 2	-	-	-	-
IPR002502	STR	DC_0013	38	157	InterPro cluster	N-acetylmuramoyl-L-alanine amidase domain	Central	Low	Positional only	8 proteins / 25 hits
IPR036505	STR	IPR036505	40	160	Merged direct domain	N-acetylmuramoyl-L-alanine amidase/PGRP domain superfamily	Central	Low	Positional only	8 proteins / 8 hits
G3DSA:2.30.30.40	RBD	G3DSA:2.30.30.40	198	290	Merged direct domain	G3DSA:2.30.30.40	C-terminal	Low	Positional only	7 proteins / 7 hits
IPR003646	STR	DC_0019	213	268	InterPro cluster	SH3-like domain, bacterial-type	C-terminal	Low	Positional only	6 proteins / 9 hits
IPR003646	STR	DC_0019	214	280	InterPro cluster	SH3-like domain, bacterial-type	C-terminal	Low	Positional only	6 proteins / 9 hits

Taxonomy

	Name	Taxonomy ID	Lineage
Phage	Bacillus phage Tomato [NCBI]	2703960	Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host	No host information

Coding sequence (CDS)

Genbank protein accession

QLF85889.1 [NCBI]

Genbank nucleotide accession

MT584805.1 [NCBI]

CDS location

range 29218 -> 30090
strand -

CDS

ATATTAGAAGCAGCCAAAAATAGAAAGGATGATTCATTGATGAATATCAATACACAATACTTGGTAACTGACCCTGACCGTTTAGCAGTCATTGGACCTAACTGGATGGACCCTACCGAGATTACGTTCCATAACACGTATAACGATGCATCAGCTTCAGCAGAAGTACGTAATGTTCGTAATAACTCAAAAGGTACATCATTCCACACAGCGGTCGATGACTTCGAAGTTCAACAAGTCGTACCATTTGACCGAAACGCATGGCATGCCGGAGACGGTACGTACGGACGAGGTAACCGTCACTCTATCGGTGTCGAAATTTGTTACTCTATGAGTGGTGGAGAACGCTATCGTAAAGCCGAGTTAAATGCTATCGAGCATATCTCAGATTTAATGGTACGTTTCAATATTCCAATCTCTAAAGTTAAGACTCACCAAGAGCGTAATGGTAAATATTGTCCACACCGTATGTTAGACGAAGGTCGTGTAGGTTGGTTTAAAGCAGAGTGTGAACGTCGTGCTAATGAGAAACGCAACGGTGGCGGCGGTACACCAACTCCAGAACCAAAACCAGTACCTAAACCAGACCCTGCACCAAAACCACCATCTGGTGACTACGATTCTAGTTGGTTTACTAAAGAGACAGGAACTTTCGTAACAAATACTGCAATCAAGTTACGTACAGCACCATTCACAAGTGCAGGAGTAATCGCTACACTTCCGGCTGGTTCTACAATTAACTACAATGGTTTCGGTATCGAATACGATGGTTATGTCTGGATTCGTCAACCACGTAGCAATGGTTACGGCTACTTAGCTACTGGTGAATCTAAAGGCGGTAAACGCGTGAACTACTGGGGTACATTTAAGTAA

Genome Context

Tertiary structure

PDB ID

5ea3c64810d9fa0f5a5e2dd723a71616da16ba46a602e3f3fe0266612b510532

ESMFold

Source ESMFold

Method ESMFold

Resolution 0,7730

Oligomeric State monomer

Download PDB

Model Confidence

Very high
pLDDT > 90

High
90 > pLDDT > 70

Low
70 > pLDDT > 50

Very low
pLDDT < 50

Protein

Domains

Domains [InterPro]

Domains [InterPro]

Taxonomy

Coding sequence (CDS)

Coding sequence (CDS)

Genome Context

Genome Context

Tertiary structure

Predicted Aligned Error (PAE)

Model Confidence