Protein

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Genbank accession
QZI85676.1 [GenBank]
Protein name
central tail fiber receptor binding protein
RBP type
TSP
Evidence RBPdetect
Probability 0,86
Protein sequence
MPLCLIDNATLIGVTSFPRFVKDGGYRWGPDVGTGRSAPKYAIPYDQVVSRKRGIYAGSYADDFYDQLHISVQSLDVGTVVATVTKTFSIWNSSTGKSRKLVAVTSDNDAGLQLVGELNFPVMFHPLQSRDYTIIASPTGPSNINAMFYFRFDDNTVLALNVVGRRAVAWTARPNWAESVTVRMEWLTDVLQSRFSFEQRRKLRYGPRKNYEFSVLMDNTERRRVETNVSGWGVRPYVAPMWEFGQPIQAVPAGSTFIPCQTAGRPIYPGAMVMLLKDSKTFEILEVATLVDNGIVCTSQLTSSWPNGAKLYPATTMIMEEGMRATRVGQQGMYATIRMRSTVSTDLYNVPAWAPKMYLGRPVMEVPPEESDEPTVLFERVYDMLPSETGIDLIEDVADLTVMTQSHRWALGTQKDFIEFYSLMFYLAGKLKTIWLPSFRSDFTVVADIVSNQSFIDVEHTGYVEMIEGAEGRKNIRIQFRDGTVLYRAIDSAVVLDDETERLFFLDSIPKAYTVRDVQMVSFMMLARQNSDAIEMTWSHESLMEAETTFKMVREASA
Physico‐chemical
properties
protein length:558 AA
molecular weight: 62990,23670 Da
isoelectric point:5,36062
aromaticity:0,10932
hydropathy:-0,14570

Domains

Domains [InterPro]

No domain annotations available.

Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
QZI85676.1
1 558
Domain Start End Length (AA) Confidence
N-terminal 1 16 16 0,9370
Central domain 17 220 205 0,1394
C-terminal 221 558 337 0,4065
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-16
Central
17-220
C-terminal
221-558

Taxonomy

  Name Taxonomy ID Lineage
Phage Stenotrophomonas phage Summit
[NCBI] 		2859661 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Stenotrophomonas maltophilia
[NCBI] 		40324 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Lysobacterales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
QZI85676.1 [NCBI]
Genbank nucleotide accession
MZ326862 [NCBI]
CDS location
range 17481 -> 19157
strand +
CDS
ATGCCTCTGTGCCTGATCGACAACGCGACTCTGATCGGGGTGACCAGTTTCCCCCGATTCGTGAAGGACGGTGGCTACCGTTGGGGGCCGGACGTTGGCACGGGCAGGTCTGCGCCGAAGTACGCCATCCCGTACGATCAGGTGGTGAGCCGTAAGCGGGGTATTTACGCCGGGTCGTACGCAGACGACTTCTATGACCAGCTGCACATCAGCGTGCAGTCTCTGGACGTGGGAACCGTGGTGGCTACGGTGACCAAGACGTTCTCGATCTGGAACTCGTCCACCGGTAAGAGCCGCAAGTTGGTGGCGGTGACCTCTGACAACGACGCAGGATTGCAGCTGGTAGGTGAACTGAACTTCCCGGTGATGTTCCATCCGTTGCAGAGCCGCGACTACACGATCATTGCCAGCCCGACCGGCCCGTCGAACATCAATGCGATGTTCTATTTCCGGTTCGATGACAACACTGTTCTCGCCCTGAATGTCGTGGGCCGACGCGCGGTGGCATGGACGGCACGCCCCAACTGGGCGGAGTCTGTGACCGTGCGTATGGAGTGGCTGACGGATGTTCTCCAGTCCCGGTTCTCGTTTGAGCAGCGCCGGAAGTTGCGCTACGGCCCGAGGAAGAACTATGAGTTCTCGGTGCTGATGGACAACACTGAGCGCCGTCGAGTGGAGACGAACGTCAGTGGCTGGGGCGTACGTCCGTACGTGGCCCCGATGTGGGAGTTCGGTCAGCCGATCCAAGCAGTTCCGGCTGGTTCGACCTTCATCCCCTGCCAGACGGCGGGCCGTCCGATCTATCCGGGGGCGATGGTGATGCTGCTGAAGGACAGCAAGACCTTCGAGATTCTGGAAGTGGCGACGTTGGTGGACAACGGGATTGTGTGTACCTCCCAGTTGACTAGCAGTTGGCCCAACGGGGCGAAGCTGTACCCGGCAACGACCATGATCATGGAAGAAGGGATGCGGGCCACCCGCGTGGGTCAGCAGGGTATGTATGCGACTATCCGGATGCGGAGTACAGTATCGACTGACCTGTACAACGTCCCGGCGTGGGCACCGAAGATGTATTTGGGTCGCCCGGTGATGGAAGTGCCGCCAGAAGAATCGGATGAGCCGACCGTCCTGTTCGAGCGGGTGTATGACATGCTGCCGAGCGAGACGGGCATCGATTTGATCGAAGACGTGGCTGACTTGACGGTGATGACCCAGAGCCATCGTTGGGCGCTCGGAACCCAGAAAGACTTCATTGAGTTCTACAGCCTGATGTTCTATCTGGCGGGCAAGTTGAAGACGATCTGGCTACCGAGTTTCCGATCCGACTTCACGGTGGTGGCTGACATTGTTTCGAACCAGTCGTTCATCGACGTGGAACACACCGGCTACGTGGAGATGATCGAAGGGGCCGAGGGGCGGAAGAACATCCGCATCCAGTTCCGAGACGGGACGGTCCTGTACCGGGCCATCGACAGTGCAGTTGTGCTGGATGACGAGACCGAGAGGCTGTTCTTCTTGGACTCGATCCCGAAGGCGTATACTGTGCGTGATGTGCAGATGGTGAGTTTCATGATGCTGGCCCGCCAGAACTCGGATGCTATTGAAATGACGTGGAGCCACGAAAGCCTGATGGAAGCAGAAACCACGTTCAAGATGGTCCGGGAGGCGTCGGCATGA

Genome Context

Genome Context

Tertiary structure

PDB ID
d6e6040c654d2acad2d1d1a787d44576264b73b8ffeef69851deadfe5cd3869d
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,8614
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Complete genome sequence of Stenotrophomonas maltophilia phage Summit Bishop,A., Zhang,X.-H., Clark,J., Burrowes,B., Liu,M. and Gill,J. 2022-04-21 — GenBank