Protein

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Genbank accession
WDS61787.1 [GenBank]
Protein name
tail fiber protein host specificity
RBP type
TF
Evidence Phold
Probability 1,00
TSP
Evidence RBPdetect
Probability 0,54
Protein sequence
MAGVVPNVPFWASDVRNVTGTGNMWDAGVWLLKRQPPFWMSEFAGKGEITINITSSNHNFDPNWLVNHMSDLCAGNWAGQRFIINVMSGVQLVGMRKGIAYSATGDCMWFGGDMRLCESIIINNWGDILGRGAQAIGVENFGSPNGAQNPPNRGGHAIIADGVGGILTINNHNNIGGGGSAGMGDGPPEWWDGIPHGSLGGQGGAPFGESMSAPNRVSGGQFRRPPNAGYGPGGNGWYSYEDGNSRIRYGQSGGWGEQGYTGSERGQDVQPISNPGRAVYWAGARPNIQGGGWYAGGDGQ
Physico‐chemical
properties
protein length:300 AA
molecular weight: 31585,53740 Da
isoelectric point:5,70006
aromaticity:0,10333
hydropathy:-0,43433

Domains

Domains [InterPro]
DC_1679
STR
7–180
DC_1679
IPR007932
RBD
48–297
IPR007932
WDS61787.1
1 300
Architecture
STR
RBD
STR 7-180 | RBD 181-297 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
WDS61787.1
1 300
Domain Start End Length (AA) Confidence
N-terminal 1 10 10 0,3019
Central domain 11 289 280 0,9590
C-terminal 290 300 10 0,1382
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-10
Central
11-289
C-terminal
290-300

Taxonomy

  Name Taxonomy ID Lineage
Phage Cronobacter phage vB_Cdu_VP8
[NCBI] 		3020854 No lineage information
Host Cronobacter dublinensis
[NCBI] 		413497 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Enterobacterales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
WDS61787.1 [NCBI]
Genbank nucleotide accession
OQ361773.1 [NCBI]
CDS location
range 156286 -> 157188
strand +
CDS
ATGGCTGGTGTAGTTCCTAATGTGCCCTTTTGGGCGTCTGACGTAAGAAATGTAACTGGCACTGGCAATATGTGGGATGCTGGAGTGTGGCTGCTTAAAAGGCAGCCACCTTTTTGGATGTCGGAATTCGCAGGTAAAGGTGAAATCACCATCAATATAACCTCGAGCAACCACAATTTTGATCCAAACTGGTTAGTTAACCACATGTCTGATTTGTGCGCTGGTAATTGGGCTGGTCAGAGATTTATCATAAATGTTATGTCTGGCGTTCAACTTGTTGGGATGCGTAAGGGTATAGCTTATAGTGCTACGGGTGACTGTATGTGGTTTGGTGGTGATATGCGATTATGTGAATCAATTATCATCAATAACTGGGGAGATATTTTAGGTCGAGGCGCACAAGCTATTGGTGTAGAAAACTTTGGTAGTCCTAACGGCGCACAAAATCCTCCTAACAGAGGTGGTCATGCTATAATTGCTGATGGAGTCGGCGGAATTTTGACTATCAACAATCACAATAACATTGGAGGAGGCGGCAGCGCCGGTATGGGTGATGGCCCTCCTGAATGGTGGGATGGCATACCTCATGGTTCTTTAGGTGGACAAGGCGGCGCGCCGTTCGGCGAAAGTATGTCAGCTCCTAATCGTGTAAGTGGTGGTCAATTCCGCAGACCTCCTAATGCAGGATACGGTCCTGGAGGTAATGGATGGTATTCATATGAAGATGGAAACAGCCGTATTAGATACGGACAATCAGGTGGTTGGGGTGAACAAGGTTACACAGGAAGTGAAAGAGGTCAAGATGTTCAACCGATTTCGAATCCTGGACGAGCTGTATATTGGGCCGGCGCTCGGCCAAACATCCAAGGCGGAGGTTGGTATGCAGGAGGCGATGGCCAATAA

Genome Context

Genome Context

Tertiary structure

PDB ID
64b682636dd0e8d6abf11fbcae339d7388aa1cc0ee136907ef4e07d50507fa12
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,7053
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50