Protein

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Genbank accession
AXC36556.1 [GenBank]
Protein name
putative DNA condensation protein
RBP type
TSP
Evidence DepoScope
Probability 1,00
Protein sequence
MWYAGNGASFGLSTDKSTTWASAKIVFDRITALGKTIKQIAVSAGALSVLCTDNTIWNTGYGSYGQLGNGRSTDSLSSFVQGTVPTGVTPSKILANFLMQGFIGTDGRLYYTGAISGVGTTDMTLYSKYTLCSQITNTYTVKDYTTNSSYFAFAIASNNSTNKLFAYHGGGQYFGQLANGSTSQTYISLRQTTQAPGDIIRSSVGYSYFSNHIITSLGVYATGYNTGDNAGQLGIGTQTDVSAYTKCVLPIEMNMNNVYVTATLYRTYLTDGIQIYSTGQNITDGGIASTVFVKDSPF
Physico‐chemical
properties
protein length:298 AA
molecular weight: 31796,03490 Da
isoelectric point:8,27215
aromaticity:0,12416
hydropathy:-0,06007

Domains

Domains [InterPro]
IPR009091
STR
1–291
IPR009091
DC_0436
RBD
2–169
DC_0436
IPR009091
STR
29–282
IPR009091
DC_0436
RBD
152–298
DC_0436
AXC36556.1
1 298
Architecture
STR
STR 1-298
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
AXC36556.1
1 298
Domain Start End Length (AA) Confidence
N-terminal 1 10 10 0,0046
Central domain 11 200 191 0,8555
C-terminal 201 298 97 0,4217
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-10
Central
11-200
C-terminal
201-298

Taxonomy

  Name Taxonomy ID Lineage
Phage Escherichia phage UB
[NCBI] 		2268588 Uroviricota > Caudoviricetes > Asteriusvirus >
Host No host information

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
AXC36556.1 [NCBI]
Genbank nucleotide accession
MH383160 [NCBI]
CDS location
range 231326 -> 232222
strand +
CDS
ATGTGGTATGCTGGAAATGGTGCATCATTCGGTTTATCAACTGATAAGTCAACAACGTGGGCTTCTGCAAAGATAGTGTTTGATAGAATAACAGCACTTGGAAAAACAATAAAACAAATTGCAGTTAGTGCAGGTGCATTAAGCGTATTATGTACAGACAACACGATATGGAATACGGGTTATGGTAGTTATGGACAACTGGGAAATGGTAGAAGTACCGATTCACTTTCATCATTTGTACAAGGAACAGTACCTACTGGAGTAACACCATCCAAAATACTGGCAAATTTTCTTATGCAAGGATTTATTGGAACCGATGGGAGATTGTATTATACTGGTGCAATATCAGGCGTAGGTACAACCGACATGACGTTATATTCAAAGTACACGTTATGTTCTCAAATAACTAATACCTATACGGTGAAAGATTATACAACAAACTCAAGTTACTTCGCTTTTGCTATAGCAAGTAATAATAGTACTAATAAATTATTTGCATATCATGGTGGTGGACAATACTTTGGTCAGTTAGCAAATGGTTCTACATCACAAACATATATTTCGTTAAGACAAACAACACAAGCACCAGGTGATATAATAAGAAGCAGTGTGGGTTATTCATATTTTTCTAATCATATTATAACTTCATTAGGTGTTTACGCAACTGGTTATAACACAGGCGATAACGCAGGTCAATTGGGTATAGGTACACAAACAGATGTGTCGGCCTATACCAAATGTGTACTACCAATAGAGATGAATATGAATAACGTATATGTTACAGCAACTTTATACAGAACTTACTTAACCGATGGTATACAAATTTACAGTACTGGACAAAATATTACAGATGGCGGTATTGCCAGTACTGTATTTGTCAAAGATTCACCATTTTAG

Genome Context

Genome Context

Tertiary structure

PDB ID
87b79a7215b08ba8d0bfb6ecd975adb826aea0e905a5c4d9b6c8a24bfab682c7
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,8595
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Characterization Of A New Bacterial Virus From Orangutan (Pongo pygmaeus) Ahmad Hisham,U.B., Ramli,N.A., Mohamad Zawawi,N.A. and Mat Arip,Y. 2008-12 — GenBank
Genome Assembly Of Bacteriophage Specific To Escherichia coli 0157:H7 Ahmad Hisham,U.B., Ramli,N.A., Mohamad Zawawi,N.A. and Mat Arip,Y. 2019-07 — GenBank