Protein

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Genbank accession
WWO60369.1 [GenBank]
Protein name
tail fiber protein
RBP type
TF
Evidence Phold
Probability 1,00
TSP
Evidence RBPdetect
Probability 0,60
Protein sequence
MAGTTDPTFRFAQNVFDTDGTDKVYDISFDLGYLDSDYVVAMSGVEDPETKLLTDMTAHAVSFIDVPSGNRVKVSPVPVANRKLIIFRQTDISKLLVRFQDGKLQTGRNMDLSATQLIMAIQEILDGLRNNNLIVEQQVSTVVDLNKIITEIYKEVLELLAAGGIVSVAPRVWSGKYDPISDDQTDFEIPGADVKDAGFYDTYMNGIGLEPDKDYIVILPTDDDPRSLIRFTKPLVEGDEWFTVLRGYAKPYTGPAPVTTLAFPVQTTQGTAVFIGKSQEFALIRCMSDNDTIATVKLIPESGDNRMVSGSWLNLAARGAGKVVLRADPGVTLAVPAGLKAEARARNSVITITCEDADTNVWLVSGDLAME
Physico‐chemical
properties
protein length:371 AA
molecular weight: 40468,52550 Da
isoelectric point:4,52236
aromaticity:0,07547
hydropathy:-0,03558

Domains

Domains [InterPro]

No domain annotations available.

Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
WWO60369.1
1 371
Domain Start End Length (AA) Confidence
N-terminal 1 258 258 0,9968
Central domain 259 360 103 0,0090
C-terminal 361 371 10 0,9932
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-258
Central
259-360
C-terminal
361-371

Taxonomy

  Name Taxonomy ID Lineage
Phage Stenotrophomonas phage SB2
[NCBI] 		3117468 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Stenotrophomonas maltophilia
[NCBI] 		40324 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Lysobacterales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
WWO60369.1 [NCBI]
Genbank nucleotide accession
PP079416.1 [NCBI]
CDS location
range 34925 -> 36040
strand +
CDS
ATGGCCGGTACGACTGACCCGACCTTCCGGTTCGCCCAGAACGTGTTCGACACGGACGGGACCGACAAGGTTTACGACATCAGCTTCGATCTGGGCTATCTGGACAGCGACTACGTGGTCGCTATGTCCGGGGTTGAAGACCCGGAGACTAAGCTGCTAACGGACATGACCGCGCATGCTGTATCTTTCATCGACGTGCCCTCGGGCAATCGTGTTAAGGTCAGCCCTGTGCCGGTCGCTAACCGTAAGCTGATCATTTTCCGTCAGACTGACATCAGCAAGCTGCTGGTGCGGTTCCAAGACGGTAAGTTGCAGACCGGACGTAACATGGACCTGTCCGCAACCCAGCTGATCATGGCAATTCAGGAGATTCTGGATGGCCTGCGTAACAACAACCTGATCGTGGAGCAGCAAGTAAGCACCGTGGTTGACCTGAACAAGATCATCACGGAGATTTACAAGGAAGTCCTCGAACTTCTGGCCGCTGGTGGCATCGTATCGGTCGCGCCTCGTGTGTGGTCCGGTAAGTACGACCCTATCTCGGACGACCAGACGGACTTCGAGATTCCCGGCGCTGATGTTAAGGACGCAGGGTTCTACGACACCTACATGAACGGCATCGGTCTGGAGCCGGACAAGGATTACATCGTGATCCTGCCGACTGACGACGACCCGCGTTCCCTGATCCGCTTCACGAAGCCGCTGGTTGAGGGCGACGAGTGGTTCACGGTCCTGCGAGGTTACGCCAAGCCGTACACCGGCCCTGCCCCGGTCACTACTCTGGCGTTCCCGGTGCAGACGACCCAAGGCACTGCCGTGTTCATCGGCAAGTCGCAGGAGTTCGCACTGATCCGGTGCATGTCGGACAACGACACCATCGCTACGGTTAAGCTGATCCCGGAATCGGGTGACAATCGTATGGTGTCCGGCTCGTGGCTAAACCTTGCAGCGCGTGGCGCCGGTAAGGTGGTGCTCCGTGCTGATCCCGGCGTGACTCTGGCCGTACCTGCGGGCCTCAAGGCCGAGGCGCGGGCCCGGAACTCCGTCATCACTATCACTTGTGAGGACGCCGACACGAACGTGTGGCTCGTCTCTGGTGATCTGGCAATGGAGTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
91ce383f749d386a34f8b8aca7525fba235a05c0b517d0e4f8d98b55275e638c
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,8129
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Novel lytic viruses for Xanthomonas sp. and Stenotrophomonas maltophilia Petrzik,K., Brazdova,S., Sovova,L. and Neoralova,M. 2023-07-17 — GenBank