Protein

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Genbank accession
QHR72939.1 [GenBank]
Protein name
tail protein B
RBP type
TSP
Evidence DepoScope
Probability 1,00
Protein sequence
MPVYQGAYKSILGGVSQQVYTDRQLSQVEEQVNMTSDTVRGLRKRPGTRDTKLVDSTNASVWSLGNFGHLRFYTTNLGWGVTTFVVNTLTGYVTSFVETETVQFMGQSNYLITSNPDDIVFTTVGNTMYVANCSKLPVLLENETRMNPGRRGYFFVLAGAYGKQYTVRIETSGGAYSASYTTPDGTTAGDATKATAEYIIGQLKTQLDTAIGGSTGLEVVQTDGAYMYLQTTAAYTDLNVSTNTGSTYAIASNTHRVDLTTKLPARLPTQAGGFIMTVGDDSFAQYFQWDYANSRWVEKGAYGSPTGINPSGMPLVFNTTSTLNQHSFAQGSWPGRTAGDDKTNAIPAFTDANGVGITGLASFQGRLIIFSGPYITMGSSDKDDRTNFFRTTVTQLLESDRIEFTASSFAGASFRYGIPFNSDLILASEEHQAVIPGRNQILSPSNATAVLTSTYQMDTGVAPTTSGRSLYYSYPRSNSSFSIKEMLPSGYTDLQYVSQDVTDHLPTYLEGANSYISASTTNNIVVFGSTTERSTLYVNEYLWSGDEKVMSSWHRWELYGTIHAAWFVREVLVALVEQNGHMHMLTLSMRDSPDPTDPARFLPAMDYAQNMTVTNPSTDSSYIQFAADGVQKALWDIIQARYLADGNTDFMTTVVPSGDYIGAEVGIKSVDTTNRRLYLQPSYGSTTLWVGLRFTALFSPTPPRIFNGDGSYMDVNKMVVMFYNFTLRYTSLFNITATDRGAYDAYNIESSPIRYTSKELGLESAMLAKRAHLKVRMGLEVESSSMVVDSSTAGDLNIQGLGYYVKFYNRTRRI
Physico‐chemical
properties
protein length:814 AA
molecular weight: 89586,97020 Da
isoelectric point:5,37557
aromaticity:0,11548
hydropathy:-0,24840

Domains

Domains [InterPro]
IPR058003
TTP
1–814
IPR058003
DC_0058
STR
1–814
DC_0058
QHR72939.1
1 814
Architecture
STR
STR 1-814
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
QHR72939.1
1 814
Domain Start End Length (AA) Confidence
N-terminal 1 141 141 0,9380
Central domain 142 355 215 0,3093
C-terminal 356 814 458 0,3202
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-141
Central
142-355
C-terminal
356-814

Taxonomy

  Name Taxonomy ID Lineage
Phage Escherichia phage usur
[NCBI] 		2696459 Uroviricota > Caudoviricetes > Autographivirales > Stentvirinae > Bonnellvirus
Host Escherichia coli K-12
[NCBI] 		83333 Bacteria > Proteobacteria > Gammaproteobacteria > Enterobacteriales > Enterobacteriaceae > Escherichia

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
QHR72939.1 [NCBI]
Genbank nucleotide accession
MN850624 [NCBI]
CDS location
range 13290 -> 15734
strand -
CDS
ATGCCAGTATACCAAGGCGCTTATAAATCCATCCTCGGCGGCGTGAGCCAGCAGGTCTACACTGACCGCCAGCTATCGCAGGTTGAGGAACAGGTCAATATGACCTCTGATACCGTGCGTGGCCTGCGTAAACGCCCCGGCACCCGCGACACTAAACTGGTGGACTCCACCAACGCCAGTGTCTGGAGCCTTGGTAACTTTGGCCACCTGCGCTTTTACACAACCAACCTTGGGTGGGGTGTAACTACCTTCGTGGTCAATACGCTGACCGGGTACGTCACCTCCTTCGTTGAGACTGAGACTGTCCAATTCATGGGGCAGTCCAACTACCTGATTACCTCCAACCCTGACGACATTGTATTCACGACCGTAGGCAACACGATGTATGTGGCCAACTGTTCGAAGCTACCTGTTTTGCTTGAGAACGAAACGCGAATGAATCCGGGTCGCCGGGGTTACTTTTTCGTTTTGGCTGGTGCCTATGGCAAGCAGTACACTGTTCGCATTGAGACGAGCGGCGGCGCATACAGCGCCTCATACACCACACCGGACGGCACTACCGCTGGTGATGCTACCAAGGCCACTGCCGAGTATATCATTGGCCAGTTGAAGACTCAGCTCGACACTGCCATTGGCGGCTCTACCGGGCTTGAGGTTGTGCAGACGGATGGGGCGTACATGTACCTCCAGACGACTGCCGCTTACACTGACCTGAACGTGTCCACGAACACTGGCTCAACGTATGCCATCGCATCAAACACTCACAGGGTTGACCTGACCACCAAGCTCCCGGCACGTCTGCCGACTCAGGCTGGTGGCTTCATCATGACCGTAGGTGATGACAGCTTTGCGCAATACTTCCAGTGGGATTACGCCAACTCGCGCTGGGTGGAGAAGGGTGCCTACGGCTCACCGACCGGGATTAACCCAAGTGGTATGCCGCTGGTATTCAACACGACCAGCACGCTCAATCAGCACTCGTTCGCTCAAGGCTCTTGGCCGGGGCGTACTGCTGGCGATGACAAGACCAACGCCATTCCTGCATTCACCGACGCCAATGGCGTGGGCATCACTGGGCTGGCATCGTTCCAAGGTCGCCTGATTATCTTCTCTGGCCCGTACATCACCATGGGTTCCAGCGACAAGGATGACCGGACTAACTTCTTCCGCACCACTGTGACCCAGTTGTTGGAGAGTGACCGCATTGAGTTCACCGCGTCGAGCTTCGCTGGCGCATCGTTCCGGTATGGCATCCCGTTCAACTCTGACCTGATTCTGGCCAGTGAAGAACATCAGGCCGTCATCCCCGGACGTAACCAGATTCTGTCACCGAGCAACGCCACGGCTGTGCTCACCTCGACGTACCAGATGGACACTGGCGTAGCGCCGACCACCTCTGGCCGCAGCCTGTATTATTCGTACCCGCGTTCGAACAGCTCGTTCTCCATCAAGGAGATGCTGCCGTCCGGCTACACGGATTTGCAGTACGTGAGTCAGGACGTGACCGACCACCTGCCGACCTATCTGGAAGGGGCTAACAGCTACATCTCGGCCAGCACCACGAATAACATCGTCGTGTTTGGCTCGACCACTGAGCGCTCGACACTGTACGTGAACGAGTACCTCTGGTCAGGGGATGAGAAGGTAATGTCCTCGTGGCATCGCTGGGAGCTGTACGGCACTATCCACGCAGCGTGGTTTGTCCGTGAGGTTCTGGTGGCGCTGGTTGAGCAGAATGGCCACATGCACATGCTCACGCTGTCTATGCGTGATTCACCAGACCCGACTGACCCAGCACGATTCCTGCCTGCGATGGACTATGCGCAGAACATGACCGTGACCAACCCAAGCACTGATAGCTCGTACATCCAGTTCGCTGCCGATGGCGTGCAGAAAGCGCTGTGGGATATTATTCAGGCCCGGTATCTGGCCGATGGCAACACTGACTTCATGACCACGGTTGTGCCGTCCGGCGACTACATTGGTGCCGAGGTCGGTATCAAGTCAGTGGACACCACGAACCGCCGTCTGTACCTGCAACCATCTTATGGCTCCACAACTCTGTGGGTTGGCCTGCGCTTCACAGCACTGTTCAGTCCTACGCCGCCGCGCATCTTCAACGGTGACGGCTCGTACATGGACGTGAACAAGATGGTCGTGATGTTCTATAACTTCACCCTGCGGTACACCAGCCTGTTCAATATCACGGCGACCGACCGGGGAGCATACGACGCCTACAACATTGAGTCCAGCCCGATTCGTTACACCAGTAAGGAACTCGGATTGGAATCTGCAATGCTGGCGAAACGTGCGCACCTGAAAGTTCGCATGGGCCTTGAGGTCGAATCCAGCAGCATGGTCGTTGATTCGTCTACGGCTGGCGACCTGAATATTCAGGGGCTGGGTTATTACGTCAAGTTCTACAATCGCACTCGGAGAATTTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
58d847d4a4ff4574d3a53dc907d0cad32529956c61692e2a7b909b972a1d6c39
ColabFold
Source ColabFold
Method ColabFold
Resolution 0,2931
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Exploring the Remarkable Diversity of Culturable Escherichia coli Phages in the Danish Wastewater Environment Olsen,N.S., Forero-Junco,L., Kot,W. and Hansen,L.H. 2020 — GenBank