Protein

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Genbank accession
WPK29315.1 [GenBank]
Protein name
tail fiber protein
RBP type
TF
Evidence Phold
Probability 1,00
TSP
Evidence RBPdetect
Probability 0,88
Protein sequence
MAAMTPQQSVRAVYKAEQEINSTENKNTSASTVKGDNGFCILASVYNSSSDQYIQNFKAITFDSVPEIGVTREADVTSFPVESGSDVSDHVQIKNNRFKLSGIITETPIRLMRDQLYSAGVNGARISQAIEYLDQIFESRQPIVLLTEHRTFENVILKGYSYDYKSEFAMQFDLEFEQIRLVSKATTNAIAVKTAPNKSTGGDVKGQVSSDGPKSDITVRTAKATNTPTNNGG
Physico‐chemical
properties
protein length:233 AA
molecular weight: 25541,15280 Da
isoelectric point:5,51687
aromaticity:0,07725
hydropathy:-0,42876

Domains

Domains [InterPro]
DC_0628
STR
42–233
DC_0628
IPR048494
ATT
62–188
IPR048494
WPK29315.1
1 233
Architecture
STR
ATT
STR
STR 42-61 | ATT 62-188 | STR 189-233
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
WPK29315.1
1 233
Domain Start End Length (AA) Confidence
N-terminal 1 17 17 0,8784
Central domain 18 216 200 0,0510
C-terminal 217 233 16 0,9812
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-17
Central
18-216
C-terminal
217-233

Taxonomy

  Name Taxonomy ID Lineage
Phage Escherichia phage vB_EcoM_EP57
[NCBI] 		3090672 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host No host information

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
WPK29315.1 [NCBI]
Genbank nucleotide accession
OR544956.1 [NCBI]
CDS location
range 69376 -> 70077
strand -
CDS
ATGGCAGCAATGACTCCACAACAGTCGGTGAGAGCCGTCTATAAGGCAGAACAGGAAATCAACTCTACCGAGAATAAAAATACCTCGGCATCTACTGTAAAGGGTGATAATGGTTTCTGCATTTTAGCAAGTGTTTATAATAGTTCAAGTGATCAATACATTCAAAACTTTAAAGCAATTACTTTCGATTCAGTCCCTGAAATAGGTGTAACTCGTGAGGCAGATGTTACAAGTTTTCCAGTAGAATCAGGATCGGATGTAAGTGACCACGTTCAAATAAAAAACAACAGATTTAAACTTTCAGGTATAATTACCGAAACACCAATTCGGCTTATGCGAGATCAATTATACAGTGCAGGTGTAAATGGTGCAAGGATTTCTCAAGCAATAGAATATCTAGATCAAATATTTGAGTCAAGACAACCAATAGTTCTTTTGACAGAACACAGAACTTTTGAAAATGTTATTCTCAAAGGCTACTCTTATGATTATAAATCTGAATTTGCTATGCAATTTGATTTAGAGTTCGAACAAATCCGTCTCGTTTCTAAGGCCACTACTAATGCTATTGCTGTAAAAACAGCACCAAATAAATCGACTGGTGGTGATGTGAAAGGTCAAGTTTCTTCGGATGGTCCTAAGTCAGATATTACAGTAAGAACTGCCAAAGCTACTAATACCCCAACAAACAACGGAGGTTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
a714d04ef47d012d5fad2fb327253bb9a6100411e8967e5594c774984f9354e2
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,7260
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Whole genome sequencing of NWU_EP_32a Oluwarinde,B.O., Montso,P.K. and Ateba,C.N. 2024-10-22 — GenBank