Protein

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Genbank accession
AZV00958.1 [GenBank]
Protein name
short tail fibers protein
RBP type
TF
Evidence RBPdetect
Probability 0,90
Protein sequence
MSTNTLKHISDKSEFKSFDPTGSNFPPDITNVQEALATISLIGVTGNVPSATETSQGIIRLATTQEVMDGLDAYSAVTPATLKARLDIPTQATETYVGITRYATNAEAIAGTEPQAAIVATSLKAVMDYTFENRLSTENATGVIKISTTPAALAGTDDTTAMTPLKVSQAIGAATAALPVYSTATTTNEGLVRLATNAEVGNGNLSVGIAISPAGLATLTSTEERSGIIKLAGWDMVSNGTDHTAAVTPASLLARTGNTGRIGLVRLSTTVGQGDGNTALAYNANVISTSGGEIWGTLNVNGALRRNGVDVVTHDQLSDSVPVGTICRGWWGAIPDFRGLYPRGANMVGGYSEGEVNPHIAGNRGEDGKGKARLGNGVGSFPQSSVQAQALRYHKHAGGFGEHDNAGAFGNTATYTTLNSEGLIANETRPWTMSVLFIIKVE
Physico‐chemical
properties
protein length:442 AA
molecular weight: 45773,49970 Da
isoelectric point:5,35585
aromaticity:0,05430
hydropathy:-0,09977

Domains

Domains [InterPro]
DC_0176
STR
1–420
DC_0176
SSF69349
STR
248–327
SSF69349 IPR044916
G3DSA:2.10.280.10
Unmapped
248–285
G3DSA:2.10.280.10 SSF88874
IPR015173
STR
251–309
IPR015173 IPR027448
AZV00958.1
1 442
Architecture
STR
STR 1-441 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Taxonomy

  Name Taxonomy ID Lineage
Phage Escherichia phage vB_EcoM_005
[NCBI] 		2500761 Uroviricota > Caudoviricetes > Pantevenvirales > Tevenvirinae > Dhakavirus
Host Escherichia coli O157
[NCBI] 		1045010 Bacteria > Proteobacteria > Gammaproteobacteria > Enterobacteriales > Enterobacteriaceae > Escherichia

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
AZV00958.1 [NCBI]
Genbank nucleotide accession
MK295203 [NCBI]
CDS location
range 51117 -> 52445
strand -
CDS
ATGTCAACAAACACACTAAAACACATTAGTGATAAATCGGAATTCAAATCATTCGACCCTACTGGGTCGAATTTCCCGCCTGATATTACTAATGTTCAAGAAGCATTGGCAACTATTTCATTAATCGGCGTCACAGGTAATGTTCCTTCAGCCACAGAAACATCCCAAGGTATTATTCGTCTTGCCACCACACAAGAAGTAATGGACGGATTGGACGCTTATAGTGCAGTGACTCCAGCAACTTTAAAAGCCCGTTTAGATATTCCTACTCAGGCAACAGAAACTTATGTAGGTATCACTCGTTACGCTACTAACGCTGAAGCCATAGCAGGCACAGAGCCCCAGGCTGCAATCGTAGCAACCTCTTTGAAAGCGGTAATGGATTATACATTTGAGAACCGTTTATCAACAGAGAACGCCACAGGCGTTATCAAGATTTCAACTACACCTGCTGCATTAGCTGGTACCGATGATACCACCGCAATGACCCCACTTAAAGTATCGCAAGCAATTGGTGCAGCGACAGCAGCGTTACCGGTTTATTCTACGGCAACGACTACAAATGAAGGTTTGGTTCGTTTAGCGACTAATGCCGAAGTTGGTAATGGAAATCTTTCTGTAGGTATCGCTATTTCTCCTGCAGGATTAGCCACATTAACATCCACCGAAGAACGAAGCGGTATTATTAAACTCGCGGGTTGGGATATGGTATCTAATGGTACTGACCACACTGCCGCTGTTACACCTGCTTCTTTGTTAGCTCGTACAGGTAATACTGGTCGTATTGGATTGGTTCGATTATCTACTACTGTGGGCCAAGGTGATGGTAATACGGCACTGGCTTATAATGCCAACGTTATTTCTACTTCAGGTGGTGAAATATGGGGTACTTTAAACGTTAATGGCGCATTACGTCGTAATGGTGTTGATGTTGTTACCCACGACCAATTATCAGATAGCGTCCCTGTAGGTACTATTTGTCGGGGATGGTGGGGTGCTATTCCAGATTTCCGTGGATTATATCCTCGTGGCGCTAACATGGTCGGTGGATATTCTGAAGGCGAAGTTAACCCGCATATTGCCGGTAACCGAGGAGAAGACGGTAAAGGTAAAGCCCGTTTAGGTAATGGTGTTGGTTCTTTCCCACAATCTTCCGTTCAAGCCCAAGCATTACGTTATCATAAACATGCTGGTGGTTTTGGTGAACATGATAATGCTGGTGCCTTCGGTAATACCGCTACCTATACCACACTTAATAGTGAAGGTCTTATTGCCAATGAAACACGTCCATGGACAATGTCCGTTCTTTTTATTATTAAAGTAGAATAA

Genome Context

Genome Context

Tertiary structure

PDB ID
8b481b37b147ecb6508cd85af5fb7cbbbae56ff3bee8114b98d25296766ec772
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,6800
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Characterization of novel bacteriophages infecting Shigella spp. and E. coli O157: H7 Shahin,K., Bao,H. and Wang,R. 2020-06-17 — GenBank