Protein
View in Explore- Genbank accession
- CAH1066905.1 [GenBank]
- Protein name
- tail spike protein
- RBP type
-
TFTSPTSPTSP
- Protein sequence
-
MQVKQKYTIKQQKLALSXVNAVTLKVEPAIPDGTVRIERETDIDKMKYIFDAGALFIDQNVDADFRQIVHSQQEVRDGFIKLRGDVLPLVHGLQEALQQAQEASEAAQEAAEAVEAAAQFVQSVSDYTVLPFVTGKVYGINRRVQLDNGYIVKSTIPNNVNNPNNNMTGWVFDSELLLESFGATEGADATLAIQKAFAYIRSIGGGSIKTNLRSITVSDVCIYHDNTIFDFNKCKVEFVGSGKIVGAIYNADKTAFVGAGEAEIYYKAAKTRAIQNPNARITSNAPRKSQSIIVDNTAGFVVGDFIFVSNGYCDMWRVMEQYESTGLPVNRSFQDWVRPDVDLWRCEIVKIKSITGNTIVLEDQLENDYMAVPKTYGFFSDENSRSDAIGWNYPTIEKLNGASNCTFKNIEAVNNGATHSIVSYLGVNNNILDSVGYGTGQAFEFQTCYNSHMLRNYTCSEKIGQSIRRGSSMCIMSNATAHYRSYAATLLIWEGSNLCVANNIIVEGTGGNVSHAKIGFYFNTAWNCTGTNIQGKNVQTVVDTSFCRGGIFVDGITGVNCDSLIGSYASFDVKATNGLKKGAYKDSISEYDTSLFYVSESNDIDFRGLKDSTKYSDSKTNGRAHIYKSFALNIKDIDAENVVLWNSVDDSKVFEPSKYKIKVSGSVFKSMFLTQTYDDGEAQTRRSYIKDTDFMQFVAISNTHNTEFKGVKILGRDVAKSLILNTSHFTRLIDCEIYNNTVAIDFKGIGSAYTENWTSLVYMRDTVVDAPTKFLNYVDTSYMLSINAISSKSKGLKYLSVLTDYPKVKTYANPAGDGNVVGWFMVDNTKKTR
- Physico‐chemical
properties -
protein length: 833 AA molecular weight: 92198,67110 Da isoelectric point: 5,93629 aromaticity: 0,10697 hydropathy: -0,23882
Domains
Domains [InterPro]
DC_0044
STR
12–752
STR
12–752
Coil
Unmapped
90–117
Unmapped
90–117
1
833
Architecture
STR 12-752 |
Legend:
ATT
STR
RBD
CBM
LEC
ENZ
CHP
LNK
TAS
TTP
UNK
Unmapped
Tail Spike Domain Segmentation
Tail Spike Domain Segmentation
This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.
Domain Layout
1
833
| Domain | Start | End | Length (AA) | Confidence |
|---|---|---|---|---|
| N-terminal | 1 | 189 | 189 | 0,9926 |
| Central domain | 190 | 793 | 605 | 0,9909 |
| C-terminal | 794 | 833 | 39 | 0,9031 |
Legend:
N-terminal
Central domain
C-terminal
3D Structure with Domain Coloring
The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).
Domain Coloring
N-terminal
1-189
1-189
Central
190-793
190-793
C-terminal
794-833
794-833
Taxonomy
| Name | Taxonomy ID | Lineage | |
|---|---|---|---|
| Phage |
Acinetobacter phage MD-2021b [NCBI] |
2899279 | No lineage information |
| Host | No host information | ||
Coding sequence (CDS)
Coding sequence (CDS)
Genbank protein accession
CAH1066905.1
[NCBI]
Genbank nucleotide accession
CAKLQG020000001.1
[NCBI]
CDS location
range 39365 -> 41866
strand -
strand -
CDS
GTGCAGGTGAAGCAGAAATATACTATAAAGCAGCAAAAACTCGCGCTATCCAANGTTAATGCTGTTACTTTAAAAGTTGAACCTGCTATTCCAGATGGCACTGTTCGTATTGAACGCGAAACAGATATTGATAAGATGAAGTATATCTTTGATGCTGGTGCGTTGTTCATTGATCAGAACGTGGATGCAGATTTTCGACAGATCGTACACTCTCAGCAAGAGGTGCGTGATGGTTTTATTAAACTACGTGGCGATGTACTACCATTAGTACACGGTTTACAAGAAGCTTTGCAACAAGCACAAGAAGCTAGTGAAGCTGCTCAAGAGGCTGCGGAGGCTGTGGAGGCTGCTGCACAGTTTGTTCAGTCTGTCTCGGACTACACGGTGCTACCTTTTGTAACTGGTAAGGTTTATGGGATCAATCGTCGCGTACAACTCGATAATGGGTATATTGTTAAATCAACTATTCCTAATAATGTTAATAACCCGAACAACAACATGACTGGATGGGTCTTTGATTCGGAATTACTGCTTGAGAGTTTTGGAGCTACAGAAGGAGCTGATGCAACATTAGCCATACAGAAAGCCTTTGCTTATATTCGTTCCATTGGTGGTGGTAGTATCAAAACCAATTTACGAAGTATTACAGTTTCAGATGTCTGCATTTACCACGACAACACAATTTTCGATTTCAACAAATGTAAAGTTGAATTTGTTGGGTCTGGTAAGATTGTAGGTGCTATCTACAATGCAGATAAGACTGCTTTTGTCGGTGCAGGTGAAGCAGAAATATACTATAAAGCAGCAAAAACTCGCGCTATCCAAAACCCTAATGCAAGAATAACTTCAAATGCACCCCGAAAATCACAAAGTATTATTGTGGATAATACCGCAGGCTTTGTTGTAGGAGACTTTATTTTTGTATCAAACGGCTACTGTGACATGTGGCGAGTCATGGAGCAGTACGAGAGCACTGGACTACCTGTAAATAGATCATTTCAGGATTGGGTACGACCTGATGTGGATTTGTGGCGATGTGAAATCGTTAAAATTAAAAGCATTACAGGCAATACAATTGTTCTTGAAGATCAGCTTGAAAACGACTATATGGCTGTTCCAAAAACTTACGGATTCTTTTCGGATGAGAACTCCAGATCGGATGCTATCGGTTGGAACTATCCGACTATTGAGAAGCTGAACGGGGCATCAAACTGCACATTCAAGAATATTGAAGCTGTGAATAATGGTGCGACACATAGTATTGTTTCTTATCTCGGAGTGAACAACAACATTCTTGATAGTGTTGGTTATGGCACGGGTCAAGCATTTGAGTTTCAAACTTGCTATAACAGTCACATGCTACGCAATTACACATGCTCAGAGAAGATTGGTCAGTCAATCCGCAGAGGTTCATCAATGTGCATCATGTCGAATGCTACTGCACACTATCGTAGTTATGCCGCAACATTACTGATTTGGGAGGGTTCTAACTTATGTGTAGCCAACAACATTATTGTTGAGGGTACTGGTGGCAATGTAAGTCATGCTAAGATTGGGTTTTACTTTAACACAGCATGGAACTGCACAGGAACAAACATACAAGGCAAAAATGTACAAACTGTAGTTGATACATCTTTTTGTCGTGGTGGTATTTTTGTGGATGGGATCACAGGGGTAAACTGTGATTCGTTAATAGGTTCTTACGCCAGTTTTGATGTGAAAGCTACTAATGGTCTAAAGAAAGGCGCATATAAGGATAGCATCTCTGAATACGACACATCCTTATTTTATGTGTCGGAAAGTAATGATATTGATTTCAGAGGATTAAAAGATTCAACCAAATACAGCGATTCTAAAACCAATGGTAGAGCGCACATCTATAAGTCGTTTGCCCTAAATATCAAAGATATTGACGCTGAAAATGTAGTATTGTGGAACTCTGTAGACGACTCTAAAGTATTTGAACCTTCCAAGTACAAAATCAAAGTGTCTGGAAGTGTTTTTAAATCCATGTTCTTGACTCAGACATACGACGATGGTGAGGCGCAGACAAGACGATCTTATATTAAAGATACAGACTTTATGCAGTTTGTAGCCATATCAAATACGCACAATACGGAGTTTAAAGGTGTTAAAATTCTAGGTCGTGATGTTGCTAAATCACTTATTTTAAACACATCACACTTTACCCGTCTAATCGACTGCGAGATTTACAATAATACCGTAGCTATTGATTTCAAGGGTATAGGATCAGCATATACTGAAAACTGGACAAGTCTAGTTTATATGCGAGATACAGTAGTTGATGCGCCGACTAAGTTTTTAAATTATGTAGATACCAGCTACATGCTGTCAATTAATGCAATCAGTTCAAAATCTAAGGGTCTTAAGTATTTATCGGTACTGACTGATTATCCAAAAGTCAAAACATACGCTAACCCTGCTGGCGATGGGAATGTGGTAGGCTGGTTTATGGTTGACAATACAAAAAAAACCAGATAA
Genome Context
Genome Context
Tertiary structure
PDB ID
6a4186bbf4bbfa739785acc4dacdba1400f4feecf99bd7cdaa130701205769d3
Model Confidence
Very high
pLDDT > 90
pLDDT > 90
High
90 > pLDDT > 70
90 > pLDDT > 70
Low
70 > pLDDT > 50
70 > pLDDT > 50
Very low
pLDDT < 50
pLDDT < 50