Protein

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Genbank accession
XYH44934.1 [GenBank]
Protein name
tail fiber protein
RBP type
TF
Evidence Phold
Probability 1,00
Protein sequence
MYNISAHGLSIKVISLQTFPLGFTLSQFSDDKAPLMISDDEVAGYEMTYDGDLFSYTKATPVTVTVSVIPGQSDDYNLRALLSAKRSANSLIGFNDATTLIISYPDGQKTVFAKGTIVSGPPADSVEGGRKKTNSYLFAFAAYNSNKSLAQFIPDFLNILGR
Physico‐chemical
properties
protein length:162 AA
molecular weight: 17497,55990 Da
isoelectric point:5,23825
aromaticity:0,11111
hydropathy:-0,01173

Domains

Domains [InterPro]
IPR054440
STR
3–143
IPR054440
XYH44934.1
1 162
Architecture
STR
STR 3-143 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Taxonomy

  Name Taxonomy ID Lineage
Phage Vibrio phage JSF39
[NCBI] 		3446107 No lineage information
Host Vibrio cholerae
[NCBI] 		666 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Vibrionales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
XYH44934.1 [NCBI]
Genbank nucleotide accession
PV834959.1 [NCBI]
CDS location
range 9304 -> 9792
strand -
CDS
ATGTATAATATTTCCGCTCATGGGCTCTCGATCAAAGTAATATCTTTGCAAACGTTCCCTTTAGGTTTTACGCTTAGTCAGTTTTCAGACGACAAAGCACCCTTGATGATTTCCGATGATGAAGTCGCGGGTTATGAAATGACATATGACGGAGACCTTTTTAGTTATACGAAGGCGACTCCTGTCACTGTAACTGTTTCGGTAATACCCGGACAAAGTGACGACTATAATCTAAGGGCTCTTCTTTCGGCGAAAAGATCTGCGAATTCCCTTATCGGTTTTAACGACGCGACAACCTTGATTATTTCTTACCCTGATGGACAAAAGACGGTATTCGCGAAAGGAACTATCGTTTCTGGGCCGCCTGCTGATTCTGTAGAGGGAGGGAGAAAGAAAACGAACTCCTACCTATTCGCTTTCGCGGCTTACAATAGTAATAAATCTCTGGCTCAATTTATCCCTGATTTTCTGAATATATTGGGGCGATAG

Genome Context

Genome Context

Tertiary structure

PDB ID
14114d6a995b3105de192f0d3c1117fff421149c3ff49a09bdd0a30cdf372a5e
ColabFold
Source ColabFold
Method ColabFold
Resolution 0,7113
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50