Protein

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Genbank accession
YP_009320462.1 [GenBank]
Protein name
short tail fiber protein
RBP type
TF
Evidence GenBank
Probability 1,00
TF
Evidence Phold
Probability 1,00
TF
Evidence RBPdetect
Probability 0,74
Protein sequence
MPFYQETRTMKGAVIGTIMPWSGPVSNIPKGWIICDGTQPPANEYPLLVQAIGDTYNSGTTNLGGGFPAYTGNFTLPDLVGGKMLMDIEQSYFGSLTADRDNDPDAGNLISPYIGQNTDNGVNAAWNNVYTDVVFTLNERTGYSGNVRGNSIIDGEGEKSIFIGGRKLGHTHIRAHGHSGIYETVSGGLGSSGTATNRRPGLGVIPYDNITATFNYAAIDEAPTVFGSRFDDGVVDSVRLGHEGFTKGNVELAGSGNWGSFGSFSGFGSGDPGRTVMRVSGENPPINLSPQRVTQTSLAQSVNYDYPVLGGNGANSVPFASGGGNTNIPSGFTNYYEDTPAAGNYGTLLSNPGSSFVTDTGGGAQANVDAHDHEPITVLFDQNSLKPQSTLVADVNIPATTNLDNASNVAALQISMNTSQPSMTCIYIIRAY
Physico‐chemical
properties
protein length:432 AA
molecular weight: 45360,32730 Da
isoelectric point:4,63865
aromaticity:0,09028
hydropathy:-0,28657

Domains

Domains [InterPro]
IPR037053
ATT
5–79
IPR037053 DC_0344
IPR037053
ATT
5–85
IPR037053
SSF88874
STR
6–74
SSF88874
IPR011083
ATT
16–74
IPR011083
YP_009320462.1
1 432
Architecture
ATT
STR
ATT 5-85 | STR 86-432
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Taxonomy

  Name Taxonomy ID Lineage
Phage Synechococcus phage S-CAM4
[NCBI] 		1883367 Uroviricota > Caudoviricetes > Pantevenvirales > Potamoivirus > Potamoivirus cam4
Host Synechococcus sp.
[NCBI] 		1131 cellular organisms > Bacteria > Bacillati > Cyanobacteriota/Melainabacteria group > Cyanobacteriota > Cyanophyceae

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
YP_009320462.1 [NCBI]
Genbank nucleotide accession
NC_031900.1 [NCBI]
CDS location
range 30506 -> 31804
strand +
CDS
ATGCCTTTCTATCAAGAAACAAGAACCATGAAAGGTGCCGTTATTGGCACCATCATGCCATGGTCTGGACCTGTCAGTAATATACCAAAAGGTTGGATTATTTGTGATGGAACTCAACCACCAGCAAATGAGTATCCTTTACTTGTGCAAGCAATTGGGGATACTTATAATTCTGGAACGACTAATTTAGGAGGAGGATTTCCAGCATATACTGGCAATTTTACACTACCCGATTTAGTTGGTGGTAAAATGTTGATGGACATTGAACAATCTTATTTTGGATCATTAACTGCTGACAGAGATAATGATCCTGATGCTGGTAATTTAATTTCTCCATATATTGGACAAAATACTGATAATGGAGTCAACGCTGCTTGGAATAATGTATATACTGATGTAGTTTTCACATTAAATGAGAGAACTGGATATTCTGGAAATGTTAGAGGTAATAGTATTATAGATGGTGAAGGGGAAAAATCTATATTTATTGGTGGTAGAAAATTAGGACATACTCACATTAGAGCACATGGTCACAGTGGAATTTATGAAACTGTATCTGGAGGTCTAGGTAGTTCTGGAACAGCAACAAATCGAAGACCTGGATTAGGTGTTATACCTTATGATAATATAACGGCAACATTTAATTATGCTGCCATTGATGAAGCGCCAACAGTTTTTGGTAGTAGATTTGATGATGGTGTTGTTGACTCTGTTCGACTTGGACACGAAGGATTTACAAAAGGTAATGTTGAGTTAGCTGGATCTGGCAACTGGGGATCTTTTGGTAGTTTTAGTGGATTTGGTAGTGGAGACCCAGGAAGAACTGTTATGAGAGTTAGTGGTGAAAATCCACCTATTAACTTATCACCACAAAGAGTTACTCAAACTTCTCTTGCTCAATCTGTGAATTATGATTATCCTGTTTTAGGTGGAAATGGAGCTAATTCGGTTCCTTTTGCTTCTGGTGGTGGTAATACTAATATTCCTTCAGGATTTACTAATTATTACGAAGATACGCCAGCTGCTGGAAACTATGGCACATTACTAAGTAATCCTGGATCTAGTTTTGTTACTGATACCGGTGGTGGAGCACAAGCAAACGTTGATGCTCATGATCACGAACCAATTACAGTTTTGTTTGATCAAAATAGTTTAAAACCACAGTCCACATTGGTTGCTGATGTTAATATTCCCGCCACTACTAATCTTGATAATGCTTCAAATGTTGCAGCACTACAGATTAGTATGAACACTAGTCAACCGTCTATGACATGTATATACATCATCCGAGCATACTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
819e5de7f4166dc95d422de8fa17c66430252292b8255a6cb153410cbb13212a
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,3721
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50