Protein

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Genbank accession
AIF71714.1 [GenBank]
Protein name
minor structural protein
RBP type
TSP
Evidence DepoScope
Probability 1,00
TF
Evidence RBPdetect
Probability 0,72
TF
Evidence RBPdetect2
Probability 0,81
Protein sequence
MVLKLYKMVKEIKLRTTKEEFNATNRTLSNILNDIVQNVTDGTTIRYDDNGVAQALNVGPRGIRLNADKIDINGNREINLLIQNMRDKVDKTDIVNSLNLSREGLDINVNRIGIKGGDNNRYVQIQNDSIELGGIVQRTWRGKRSTDDIFTRLKDGHLRFRNNTAGGSLYMSHFGISTYIDGEGEDGGSSGTIQWWDKTYSDSGMNGITINSYGGVVALTSDNNRVVLESYASSNIKSKQAPVYLYPNTDKVPGLNRFAFTLSNADNAYSSDGYIMFGSDENYDYGAGIRFSKERNKGLVQIVNGRYATGGDTTIEAGYGKFNMLKRRDGNRYIHIQSTDLLSVGSDDAGDRIASNSIYRRTYSATANLHITSAGTIGRSTSARKYKLSIENQYNDRDEQLEHSKAILNLPIRTWFDKAESEILARELREDRKLSEDTYKLDRYVGLIAEEVENLGLKEFVTYDDKGEIEGIAYDRLWIHLIPVIKEQQLRIKKLEESKNEG
Physico‐chemical
properties
protein length:502 AA
molecular weight: 56541,38010 Da
isoelectric point:6,38850
aromaticity:0,08167
hydropathy:-0,63785

Domains

Domains [InterPro]
DC_0536
STR
4–501
DC_0536
IPR030392
CHP
382–499
IPR030392
AIF71714.1
1 502
Architecture
STR
STR 4-501 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
AIF71714.1
1 502
Domain Start End Length (AA) Confidence
N-terminal 1 162 162 0,7286
Central domain 163 361 200 0,7307
C-terminal 362 502 140 0,9898
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-162
Central
163-361
C-terminal
362-502

Taxonomy

  Name Taxonomy ID Lineage
Phage Staphylococcus phage phiBU01
[NCBI] 		1519999 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Staphylococcus aureus HIP07256
[NCBI] 		1334189 Bacteria > Firmicutes > Bacilli > Bacillales > Staphylococcaceae > Staphylococcus

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
AIF71714.1 [NCBI]
Genbank nucleotide accession
KF831354 [NCBI]
CDS location
range 7325 -> 8833
strand -
CDS
ATGGTTCTCAAATTATACAAAATGGTAAAGGAAATCAAATTAAGAACTACTAAAGAAGAGTTTAATGCAACCAATCGTACACTTTCAAATATATTAAACGATATTGTTCAAAATGTTACAGATGGAACAACAATCAGATATGATGATAACGGAGTGGCTCAAGCTTTGAATGTGGGGCCACGTGGTATTAGATTAAATGCTGATAAAATTGATATTAACGGTAATAGAGAAATAAACCTTCTTATCCAAAATATGCGAGATAAAGTAGATAAAACCGATATTGTCAACAGCCTTAATTTATCAAGAGAGGGTCTTGATATCAATGTTAATAGAATTGGAATTAAAGGCGGTGACAATAACAGATATGTTCAAATACAGAATGATTCTATTGAACTAGGTGGTATTGTGCAACGTACTTGGAGAGGGAAACGTTCAACAGACGATATTTTTACGCGACTGAAAGACGGTCACCTGAGATTTAGAAATAACACCGCTGGCGGTTCACTTTATATGTCACATTTTGGTATTTCGACTTATATTGATGGTGAAGGTGAAGACGGTGGTTCATCTGGTACGATTCAATGGTGGGATAAAACTTACAGTGATAGTGGCATGAATGGTATAACAATCAATTCCTATGGTGGTGTCGTTGCACTAACGTCAGATAATAATCGGGTTGTTCTGGAGTCTTACGCTTCATCGAATATCAAAAGCAAACAGGCACCGGTGTATTTATATCCAAACACAGACAAAGTGCCTGGATTAAACCGATTTGCATTCACGCTGTCTAATGCAGATAATGCTTATTCGAGTGACGGTTATATTATGTTTGGTTCTGATGAGAACTATGATTACGGTGCGGGTATCAGGTTTTCTAAAGAAAGAAATAAAGGTCTTGTTCAAATTGTTAATGGACGATATGCAACAGGTGGAGATACAACAATCGAAGCAGGGTATGGCAAATTTAATATGCTGAAACGACGTGATGGTAATAGGTATATTCATATACAGAGTACAGACCTACTGTCTGTAGGTTCAGATGATGCAGGAGATAGGATAGCTTCTAACTCAATTTATAGACGTACTTATTCGGCCACAGCTAATTTGCATATTACTTCTGCTGGCACAATTGGGCGTTCGACATCAGCGCGTAAATACAAGTTATCTATCGAAAATCAATATAACGATAGAGATGAACAACTGGAACATTCAAAAGCTATTCTTAACTTACCTATTAGAACGTGGTTTGATAAAGCTGAGTCTGAAATTTTAGCTAGAGAGCTGAGAGAAGATAGAAAATTATCGGAAGACACCTATAAACTTGATAGATACGTAGGTTTGATTGCTGAAGAGGTGGAGAATTTAGGATTAAAAGAGTTTGTCACGTATGATGACAAAGGAGAAATTGAAGGTATAGCGTATGATCGTCTATGGATTCATCTTATCCCTGTTATCAAAGAACAACAACTAAGAATCAAGAAATTGGAGGAGTCAAAGAATGAAGGATAA

Genome Context

Genome Context

Tertiary structure

PDB ID
f92080c816a9dd2de162aa31864c5ac3b194fa5d7d37ae1de9a75dae2f6dffa3
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,6115
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Beyond the Chromosome: The Prevalence of Unique Extra-Chromosomal Bacteriophages with Integrated Virulence Genes in Pathogenic Staphylococcus aureus Utter,B., Deutsch,D.R., Schuch,R., Winer,B.Y., Verratti,K., Bishop-Lilly,K., Sozhamannan,S. and Fischetti,V.A. 2014 24963913 GenBank