Protein

View in Explore
Genbank accession
BFJ60525.1 [GenBank]
Protein name
tail fiber protein
RBP type
TF
Evidence GenBank
Probability 1,00
TF
Evidence RBPdetect
Probability 0,72
TF
Evidence RBPdetect2
Probability 0,72
Protein sequence
MADNIKIEERVLDGDLVGPVNAEIDTKDFTGTVSLENSLLDGSGSEINVELSESMEVVGIDDLVEVKSEIDKSVSKAESSVAESQRQIDKANETIRNLDAISGQITNLVDTAKQAAATADNRAHDAQTSETNAADSASAAKASERAAKASQNAAKASQTAAKASETEAKAQAVEAAKQATAAKAQATIATDQAKSATASAAKADAEQKAALAAQKAAEKARDQAGSSAGDASQSAGNAYRSQQLAKASEDKANQYQADAAKSSAEAAASASSMTQSVTDANAAKIAAEAAQLASENARDVSTAKSVVASQKAAAASTSADAAKASQDEAKASQDAAKISETNAKTSESKAKTSETNAKTSETNAKSSQTAAANSAKASDTSAKASQASQVAASKSASQAAASKQAAAASASASEQSAQDSEASNQASQAAQTNAEAAQAAAEAARDAAKVSETNAKSSETKASTAATTSTSRAAASSNSAKAAATSANQAAQSKNAAKVSETNAKSSETKAKASEDSAAASASNAADANTKAMAHASDASAAQLEAEKARDTSIASKNAAKSSETKAAASASAAKASQTAAKSSETKAAASVSSAANSASAAKNSADDAATSASEAKTAEVAAKKSRDEAESFAIELRKGSVYRGTWNPNSGSYPKTPVTNSRWDVQLNTGQLEKVFDGKKWNWGDRLVYILDEKKFDIIDSGTGVISVNGETGAVTVTPDSIGAAKKTGDRFIGNVEITHGGDAAFSVNGGTNKNAEFSLTEANGYGTYIDYQGKDTNETHYGTINKGTKAPFMIARRGQNFPIFIGIPRVSVAQSSAGNSLIRRDWAQDTFFKKSGGQIAGNVDVTGVTMSSAFKLRNLTTGTREVLRSTGDKINVGNGDLDTVNILGTKLTHNDATIYTEKNKPTPYDLGAVAQGDGWKKYSKIYNVNKDIHAVLLNIEDKPLETADKSYYIRAYTVGTGTFTGAVYYLKGFNQVGGSTGTTNLTLVARQGSGSNHPEVFLDKGVPKLRTGHDNTYRISVIIEEVDNDCNPWLDLTSAYSPINRVPWNKLKDIPTAAIRWPTFNEVTGKPSKYPTDWDNVSGKPAMATRWPTWAEVGGSSYVKQVDTHLQVGANKWLRASDDDTGFLPASPNTTGKSTLGTSGWWFGTSYIAKMFAKGLDIVGNAKLNGDVHIVSNNGVNGLKVSRYTNPDVEYMNIRREDTTTYFDNFEDSSEADTVYGGFSFRGGQKDVNNDRLTELFYFSNQSIRYKGQDVYHTGNKPTPADIGALPENGTANNSNHLENKTLAQVIADARNGLANTDYAYSKATADARFFRKGQDLRVDKAGDGVLALDVGTNRDGTFYITEDNKQHGTYIRYQGATDNWTYFGTLNSNTEKDYMKVSRGSDQVYFIGNPRSLAAQSTNGDSLTKRSWVQSQLDTKMDLSRLDNLTKYGPDQISINSNFGSTRIGMGNDSYNHFYTEASRGHYFDKSIVVKGDLRVYDHQDTKLGADGKIYENGKQVYSPNNKPKIADLAQPDTVTKSLKLQSNVWATLLTKSNLKESGVYQVLITYTSAGKGGVAYSQGYTGQFYWHADNTNQDNVSEIPLQHMGTADGGEYIYLRTHAKPGNKGDHTIEIKCNRAYSAAVDFTVKLVKIM
Physico‐chemical
properties
protein length:1639 AA
molecular weight: 173202,41240 Da
isoelectric point:6,37099
aromaticity:0,06589
hydropathy:-0,60256

Domains

Domains [InterPro]
DC_1362
ATT
15–196
DC_1362 Coil Coil DC_0401 Coil DC_0608 DC_1142
Coil
Unmapped
74–101
Coil Coil
BFJ60525.1
1 1639
Architecture
ATT
STR
ATT
STR
ATT 15-196 | STR 272-376 | ATT 478-971 | STR 1135-1359 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Taxonomy

  Name Taxonomy ID Lineage
Phage Vibrio phage VF16
[NCBI] 		3137795 Viruses >
Host No host information

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
BFJ60525.1 [NCBI]
Genbank nucleotide accession
LC811684.1 [NCBI]
CDS location
range 84709 -> 89628
strand -
CDS
ATGGCCGATAATATAAAGATAGAAGAAAGAGTACTTGACGGGGATTTAGTAGGCCCTGTCAATGCCGAAATAGATACAAAAGATTTTACAGGTACAGTATCACTTGAGAACAGCTTACTAGATGGTAGTGGTTCTGAGATAAATGTAGAACTTTCCGAAAGCATGGAAGTTGTAGGTATTGACGACCTAGTAGAAGTAAAAAGTGAAATAGATAAGTCTGTAAGTAAAGCGGAGTCCTCAGTAGCCGAGTCTCAAAGACAGATAGATAAAGCTAATGAAACTATTAGAAACTTAGACGCTATTAGTGGTCAAATCACAAACTTAGTAGATACCGCAAAACAAGCAGCAGCTACAGCAGATAACCGTGCACACGATGCCCAAACTAGTGAAACAAACGCAGCAGATTCAGCATCGGCTGCTAAAGCATCGGAAAGAGCTGCTAAGGCGTCACAAAATGCAGCAAAAGCTTCACAAACAGCAGCTAAGGCAAGTGAAACAGAAGCAAAAGCTCAGGCAGTAGAAGCAGCTAAGCAAGCAACAGCAGCTAAGGCTCAAGCAACTATTGCTACCGATCAAGCTAAATCAGCAACAGCTTCAGCGGCTAAAGCAGATGCTGAACAAAAAGCAGCTTTGGCAGCACAAAAAGCAGCAGAAAAAGCTAGAGATCAAGCAGGCTCTAGTGCAGGGGATGCTTCTCAATCTGCTGGTAATGCTTATAGATCACAACAATTAGCAAAAGCTAGTGAAGATAAGGCAAACCAATATCAAGCAGATGCAGCTAAGTCATCAGCAGAAGCAGCAGCTTCAGCATCTTCAATGACTCAATCAGTAACGGATGCAAATGCCGCCAAGATAGCAGCAGAAGCGGCACAACTAGCCTCTGAAAATGCTAGAGATGTATCTACAGCTAAATCAGTTGTGGCTTCTCAGAAAGCAGCAGCAGCAAGTACTTCAGCAGACGCAGCTAAAGCCTCTCAGGATGAAGCTAAAGCCTCTCAAGATGCCGCAAAGATTAGTGAAACTAATGCTAAGACTAGTGAATCCAAAGCAAAAACTAGTGAAACTAATGCTAAGACTAGTGAGACTAATGCAAAAAGTTCACAGACAGCCGCAGCTAATAGTGCTAAAGCATCTGATACTTCAGCAAAAGCTTCACAAGCATCTCAAGTAGCTGCAAGTAAGTCAGCAAGTCAGGCAGCAGCTAGTAAGCAAGCGGCAGCTGCATCTGCTAGTGCTTCAGAGCAATCAGCACAAGACTCTGAGGCTTCTAATCAGGCCTCACAAGCAGCGCAGACTAATGCGGAAGCAGCTCAAGCAGCAGCAGAAGCAGCTAGAGACGCAGCTAAAGTTAGTGAAACTAATGCTAAGTCTAGTGAAACAAAAGCTAGTACAGCAGCTACTACATCTACAAGTCGTGCAGCTGCGTCCTCTAACTCAGCTAAAGCGGCAGCTACTAGCGCAAATCAAGCAGCTCAGTCTAAGAATGCAGCTAAAGTTAGTGAAACCAATGCTAAGTCTAGTGAGACTAAAGCGAAGGCCAGTGAAGACAGTGCAGCTGCAAGCGCATCAAACGCAGCCGATGCTAACACTAAAGCTATGGCACATGCTAGTGATGCATCGGCAGCTCAGCTTGAGGCTGAAAAAGCTCGTGATACATCTATAGCCTCGAAAAATGCAGCTAAGTCTAGTGAGACAAAAGCAGCAGCAAGTGCATCAGCAGCAAAAGCTTCACAAACAGCAGCGAAGTCTAGCGAAACAAAAGCAGCTGCTAGTGTTTCTTCAGCAGCTAATTCAGCTTCAGCAGCCAAAAACAGTGCTGATGACGCAGCCACTTCTGCTTCAGAGGCTAAAACAGCAGAAGTAGCAGCCAAAAAGTCTCGTGATGAAGCTGAAAGCTTTGCTATAGAACTTCGTAAAGGTAGTGTGTACCGTGGTACATGGAACCCTAACTCTGGTAGCTACCCTAAAACACCAGTTACTAACTCACGTTGGGATGTTCAATTAAATACCGGACAACTAGAGAAAGTATTTGATGGTAAAAAATGGAACTGGGGTGACCGCCTAGTATATATTCTAGATGAAAAGAAATTCGATATTATTGATTCTGGTACTGGTGTTATTTCTGTAAACGGTGAGACTGGGGCTGTTACCGTAACCCCTGATAGTATTGGGGCAGCTAAGAAAACTGGTGATAGATTCATTGGTAACGTGGAAATTACTCATGGAGGCGATGCTGCATTCAGTGTTAATGGTGGTACCAATAAGAATGCAGAATTCTCACTGACAGAAGCAAACGGGTATGGTACCTATATAGACTATCAAGGCAAGGATACCAATGAAACCCACTATGGTACAATAAATAAAGGTACTAAAGCACCCTTCATGATTGCTCGTAGGGGCCAAAATTTCCCTATCTTTATAGGTATACCAAGAGTAAGTGTGGCACAATCTAGTGCTGGCAATTCACTTATACGTAGAGACTGGGCACAAGATACTTTCTTCAAGAAATCTGGTGGACAAATAGCTGGTAACGTAGACGTGACTGGCGTTACTATGTCTTCTGCTTTTAAATTACGTAATTTAACTACGGGCACGCGAGAAGTACTAAGAAGCACGGGAGATAAGATCAATGTAGGTAATGGTGACTTAGATACTGTTAATATACTAGGTACTAAGTTAACGCATAATGATGCTACTATTTATACTGAGAAGAATAAACCAACCCCTTATGATTTAGGTGCAGTAGCTCAGGGAGATGGATGGAAGAAGTATAGTAAGATATACAACGTCAATAAAGATATTCACGCCGTTCTTCTTAATATAGAGGACAAGCCCCTAGAAACGGCTGACAAGTCCTATTATATTCGGGCATACACAGTAGGCACTGGTACATTTACTGGAGCAGTATACTACCTTAAAGGTTTTAACCAAGTAGGGGGTAGTACAGGTACAACTAATCTAACCTTAGTAGCTCGACAGGGGTCTGGTAGTAACCATCCAGAAGTATTTTTAGATAAAGGAGTACCTAAGCTACGAACAGGGCATGATAATACATATAGAATATCTGTTATTATAGAAGAAGTAGATAACGATTGCAACCCATGGCTAGACTTAACATCAGCATATAGTCCAATAAATAGAGTGCCGTGGAATAAATTGAAAGATATTCCTACAGCGGCAATTCGTTGGCCTACCTTCAATGAGGTTACCGGAAAGCCTAGTAAGTACCCTACCGACTGGGACAATGTTTCTGGTAAGCCAGCAATGGCTACTCGCTGGCCTACATGGGCTGAAGTAGGTGGCAGTTCTTATGTAAAACAGGTAGATACCCACTTACAAGTAGGGGCTAATAAATGGTTACGTGCTTCAGATGATGATACAGGATTCTTACCTGCATCACCAAATACTACTGGTAAATCTACGTTAGGTACAAGCGGTTGGTGGTTTGGTACATCTTATATAGCTAAGATGTTTGCTAAAGGATTAGATATAGTTGGTAATGCTAAGCTAAATGGAGATGTACACATAGTATCTAATAACGGCGTTAATGGATTAAAAGTATCTAGATACACTAACCCTGATGTTGAGTACATGAACATTAGGCGAGAAGATACTACTACTTACTTCGATAACTTTGAAGATTCTTCAGAGGCGGATACTGTATACGGTGGCTTTAGTTTTCGAGGAGGTCAGAAAGATGTAAATAACGATAGGCTTACAGAGTTATTTTACTTTAGTAATCAATCTATTCGTTATAAAGGTCAGGACGTTTACCATACTGGTAATAAACCAACGCCTGCTGATATAGGAGCTTTACCTGAAAATGGTACAGCTAACAACTCTAACCACCTTGAGAATAAAACCCTAGCTCAGGTAATTGCGGATGCTCGTAACGGGCTAGCAAATACTGACTACGCTTACTCTAAAGCAACTGCTGATGCTCGATTCTTTAGAAAAGGCCAAGATTTACGAGTTGACAAAGCAGGAGACGGTGTTTTAGCTCTTGACGTAGGTACTAATAGAGATGGTACTTTCTATATAACTGAAGACAATAAACAGCACGGTACGTACATACGTTATCAAGGGGCTACTGATAACTGGACTTATTTTGGTACACTAAACAGTAATACCGAAAAAGACTATATGAAAGTATCTCGTGGCTCAGACCAAGTATACTTCATCGGTAATCCTAGAAGCCTAGCTGCCCAGTCTACTAATGGGGATTCTCTGACAAAACGTAGTTGGGTTCAGTCTCAACTAGACACTAAAATGGATTTAAGTCGTCTGGATAACCTGACTAAGTATGGCCCTGACCAGATTAGTATTAACAGTAACTTTGGTAGTACTAGAATAGGTATGGGAAATGATAGCTATAACCATTTCTATACTGAAGCTTCTAGAGGTCATTACTTTGATAAATCTATCGTAGTAAAAGGCGACCTAAGAGTATACGACCATCAAGATACTAAACTTGGTGCTGATGGTAAGATATATGAGAACGGCAAGCAGGTATACTCACCTAATAACAAACCTAAAATTGCTGACTTAGCACAACCAGATACAGTTACTAAGAGTTTAAAACTTCAATCTAATGTTTGGGCTACTCTACTAACTAAGTCAAACCTTAAAGAATCCGGTGTATATCAAGTACTAATTACTTATACATCGGCAGGTAAAGGCGGTGTTGCCTACTCTCAGGGCTACACAGGACAGTTCTATTGGCATGCAGATAACACTAACCAAGACAACGTCTCTGAGATCCCGTTACAACATATGGGTACAGCAGACGGTGGCGAGTATATCTACCTAAGAACCCATGCTAAGCCTGGTAATAAAGGTGACCATACTATAGAAATCAAATGTAACCGAGCATACTCTGCTGCGGTAGACTTTACTGTTAAGCTCGTGAAAATAATGTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
61128d658fa317dd64e7aace4826e39697d7c23c4b47b966b9e4dfb91a4ecb4a
ColabFold
Source ColabFold
Method ColabFold
Resolution 0,6142
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Combination of a novel bacteriophage and D-serine effectively controls Vibrio parahaemolyticus growth in seafood Miura,D., Yamaki,S., Tabuchi,I., Kawai,Y. and Yamazaki,K. 2024 — GenBank