Protein

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Genbank accession
YP_009149038.1 [GenBank]
Protein name
tail fiber protein
RBP type
TF
Evidence UniProt/TrEMBL
Probability 1,00
TF
Evidence GenBank
Probability 1,00
TF
Evidence Phold
Probability 1,00
TF
Evidence RBPdetect
Probability 0,90
Protein sequence
MSTKISVTRALATLTKIEGKIEKRVDQLNTVHIAKGIDGNRQIPGSLISVDAFEKAAKADYQGLQDLLKVRDELKAAVVQSNATTKVTVGDQEMTVAQAIERKRTIQYKELLLAKLKAQYNHAQARLNKENMEFEAKLEQARAPYIGRDKSPDAEQLKVVEGPTRMISTPSIVDPLGLADTIRSLEAEIEDFTSNVDFALSEINAKTEVEIEGSL
Physico‐chemical
properties
protein length:215 AA
molecular weight: 23721,76820 Da
isoelectric point:5,61282
aromaticity:0,03721
hydropathy:-0,37860

Domains

Domains [InterPro]
DC_0027
STR
1–213
DC_0027
Coil
Unmapped
113–137
Coil Coil
YP_009149038.1
1 215
Architecture
STR
STR 1-213 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Taxonomy

  Name Taxonomy ID Lineage
Phage Salmonella phage SSE121
[NCBI] 		1204529 Uroviricota > Caudoviricetes > Vequintavirinae > Seunavirus SSE121 >
Host Salmonella
[NCBI] 		590 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Enterobacterales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
YP_009149038.1 [NCBI]
Genbank nucleotide accession
NC_027351.1 [NCBI]
CDS location
range 146734 -> 147381
strand +
CDS
ATGTCTACTAAGATTTCTGTAACCCGCGCTTTGGCTACTCTGACCAAGATCGAGGGTAAAATCGAGAAACGTGTTGACCAGCTTAACACTGTTCACATTGCAAAAGGTATTGACGGTAACCGTCAGATCCCTGGTTCTCTGATCAGTGTTGATGCCTTTGAGAAAGCTGCGAAAGCAGACTATCAGGGCCTGCAAGACCTCCTGAAAGTTCGTGACGAACTGAAAGCTGCCGTTGTGCAGTCCAACGCAACCACCAAGGTTACCGTTGGTGACCAGGAGATGACAGTTGCTCAGGCAATTGAACGCAAACGCACCATTCAGTACAAAGAGCTTCTGCTTGCCAAGCTGAAAGCCCAGTACAACCATGCTCAGGCTCGCCTGAACAAGGAGAATATGGAGTTCGAAGCGAAACTGGAACAGGCTCGCGCACCGTACATCGGTCGTGACAAGTCTCCGGATGCTGAACAACTGAAGGTCGTAGAAGGTCCGACCCGCATGATCAGCACCCCGTCTATCGTTGACCCTCTGGGTCTGGCAGACACCATCCGCTCTCTGGAAGCAGAGATCGAAGACTTCACTTCCAACGTTGACTTTGCACTGTCAGAGATCAATGCGAAGACTGAAGTAGAGATTGAGGGATCACTCTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
ff075fa9205395314348abfb2849f49337831919f8b0a78a231ddbe81e3c09c4
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,9437
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Bacteriophages quickly and effectively reduce contamination of various foods with Salmonella Woolston,J., Parks,A.R., Hanna,L.F., Charbonneau,D. and Sulakvelidze,A. 2016-07-02 — GenBank