Protein

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Genbank accession
QDK01429.1 [GenBank]
Protein name
glycosylhydrolase
RBP type
TSP
Evidence DepoScope
Probability 1,00
TSP
Evidence RBPdetect2
Probability 0,94
Protein sequence
MPAFVWTGSGYRNLRTGQVITPGPVLPSGPNIVPYSSIATSGTLSQKVESAGAGKKVAFEQGTFQFSDFNDNTLTYGFRVLVANGVLGSGRSWTTFQMTPMSSTQAGRVPVSNPPTSNGQVNPLRLMRVGWEDNANPVEVGGFSLLGTNQGHLYNGLEIYRVKPGSSVHDVLVKGIPGDLSREPGETFSLSFFRCDSTSGSPLLVDDVEIDGRDTGGTLVAASGIGVNFGTHLKFTNVNSHHMKMAHAYALYETSNLTFTNCRATDTEINGFNFENVSGTVTMTQCVTTANKGYHLGIFTNTGGAVYNIVDPIFDGTKLRIRCTGYNGGSRTQDTADIHLFVDGVERPDLIQWTMS
Physico‐chemical
properties
protein length:356 AA
molecular weight: 38218,29960 Da
isoelectric point:6,05622
aromaticity:0,09270
hydropathy:-0,20000

Domains

Domains [InterPro]
DC_2044
ATT
1–43
DC_2044 IPR012334
IPR011050
STR
42–329
IPR011050
IPR039448
ENZ
221–318
IPR039448
QDK01429.1
1 356
Architecture
ATT
STR
ATT 1-43 | STR 44-337 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
QDK01429.1
1 356
Domain Start End Length (AA) Confidence
N-terminal 1 41 41 0,9597
Central domain 42 345 305 0,9801
C-terminal 346 356 10 0,5145
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-41
Central
42-345
C-terminal
346-356

Taxonomy

  Name Taxonomy ID Lineage
Phage Microbacterium phage LeeroyJenkins
[NCBI] 		2593338 No lineage information
Host No host information

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
QDK01429.1 [NCBI]
Genbank nucleotide accession
MN096358 [NCBI]
CDS location
range 15723 -> 16793
strand +
CDS
ATGCCCGCATTTGTATGGACGGGTTCGGGATACCGCAACCTCCGGACGGGCCAGGTTATCACGCCTGGCCCCGTTCTTCCCTCCGGACCGAACATCGTCCCCTATTCGTCGATCGCCACTTCAGGAACCCTTTCCCAGAAGGTAGAAAGCGCAGGCGCAGGGAAGAAGGTGGCTTTTGAGCAGGGCACCTTCCAGTTCTCGGATTTCAATGACAACACCCTGACCTATGGCTTTCGGGTCCTGGTAGCAAACGGTGTCCTCGGCTCCGGAAGGTCATGGACAACATTCCAGATGACCCCGATGAGTTCCACCCAGGCGGGACGGGTACCCGTATCGAACCCTCCAACTTCTAACGGACAAGTTAACCCCCTTCGACTCATGCGTGTGGGTTGGGAGGACAATGCGAATCCGGTAGAGGTCGGCGGGTTTTCCCTCCTGGGTACGAATCAGGGACACCTCTACAACGGCCTGGAGATCTATCGGGTCAAGCCGGGGTCCTCAGTCCACGACGTTCTCGTAAAGGGCATCCCGGGGGATCTGTCCCGCGAACCCGGAGAAACGTTCTCTCTTTCTTTCTTCCGGTGTGACTCTACTTCAGGCAGTCCCCTACTGGTCGATGATGTGGAGATCGACGGTCGAGACACGGGCGGGACCCTCGTTGCGGCGTCGGGAATCGGTGTGAACTTCGGAACCCATCTCAAGTTTACGAACGTCAATTCACATCACATGAAGATGGCTCACGCTTACGCCCTCTACGAGACTTCGAACCTCACGTTCACGAATTGTCGCGCCACGGACACAGAGATCAACGGGTTCAACTTTGAGAACGTCTCTGGCACGGTCACAATGACCCAGTGCGTGACTACTGCGAACAAGGGGTACCACCTTGGTATCTTCACGAATACGGGAGGGGCTGTCTACAACATTGTGGACCCCATCTTCGACGGAACAAAGTTGCGCATTAGGTGTACTGGCTACAACGGAGGGTCCCGGACCCAGGACACGGCGGATATCCACCTCTTCGTGGATGGCGTCGAGCGTCCGGACCTGATCCAGTGGACGATGAGTTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
5dc2400b0da54cfe996c323892ac0da3b1d19e8f11081b9cb2b902808b89774a
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,8090
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50