Protein

View in Explore
Genbank accession
AUR96551.1 [GenBank]
Protein name
tail fiber protein
RBP type
TF
Evidence Phold
Probability 1,00
TSP
Evidence DepoScope
Probability 1,00
TSP
Evidence RBPdetect
Probability 0,91
TSP
Evidence RBPdetect2
Probability 0,95
Protein sequence
MACEDYPTKQTAKTFKLDAETVNEVVTSSDDRTNPASDGLTKKTLAGIENDATNQLSDIQQRADDQYSDINNQYVLRNKGDYVTDPLLEFYYEFADFNGLIYFPIVAPYQVDSTTYPDPSNDPNLRLGQATDDSLVTATGSTTPRRLDDRFADVVNLLDFGAVGDGVTDDSAAIQLALNSLTEGQKLISPSRTYRCSSEISRSFGRGSDRVIIELNGVFVFESSNGFHFKDVFDADIRLGVVAYLTDSIDDANASAGTGVTITSLWTSRVEIIKTVNFATGTKLVGGDLNPVSGNGMAFCDVIVRNASSPVVGGIGIEVTTIPSGTNPGYFNGNSIYAGFMRGETGLKFTKGSLQSDPFNGNFIDRPQIELCSEVGIDMEFCTSSTISWPRFEGSGEPNQYWILEREDSSRNDFYTTGAVVESKILLGGILSNRFGRMNSIGGGLVADMRFGGADNSDVTGDANELYIARTRGANTPNNTVYFGGIIGEYGGGRWNKFAGGVKDRDGNEKVFGLLDPIGQFTAIGASGLTEVPRGISYIELSTTGASDVNLIMPADREINGYTQMHLNITFFTNQIEISKSSGTVVINSGVISEAGLYLLVYRSDTWKVQKIGDKLLP
Physico‐chemical
properties
protein length:618 AA
molecular weight: 66807,34530 Da
isoelectric point:4,49474
aromaticity:0,09385
hydropathy:-0,23673

Domains

Domains [InterPro]
DC_0489
STR
1–614
DC_0489
IPR012334
STR
130–412
IPR012334
IPR011050
STR
152–456
IPR011050
IPR024535
ENZ
155–203
IPR024535
AUR96551.1
1 618
Architecture
STR
STR 1-614 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
AUR96551.1
1 618
Domain Start End Length (AA) Confidence
N-terminal 1 170 170 0,9938
Central domain 171 498 329 0,9696
C-terminal 499 618 119 0,9452
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-170
Central
171-498
C-terminal
499-618

Taxonomy

  Name Taxonomy ID Lineage
Phage Vibrio phage 1.226.O._10N.261.48.E5
[NCBI] 		1881227 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Vibrio breoganii
[NCBI] 		553239 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Vibrionales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
AUR96551.1 [NCBI]
Genbank nucleotide accession
MG592593.1 [NCBI]
CDS location
range 17920 -> 19776
strand +
CDS
ATGGCATGTGAAGACTACCCAACCAAACAAACGGCAAAGACTTTCAAGCTCGATGCTGAAACAGTAAATGAGGTCGTTACTTCTAGTGATGATCGCACTAATCCTGCCAGTGACGGATTAACTAAAAAGACGCTCGCGGGAATCGAGAATGATGCGACAAATCAACTTTCAGATATCCAACAGCGAGCAGATGATCAGTATTCAGACATCAACAATCAGTATGTTTTACGCAACAAAGGCGATTACGTAACAGACCCGCTACTAGAGTTTTACTATGAGTTTGCTGATTTTAATGGGTTAATTTATTTCCCTATCGTTGCTCCATATCAGGTTGATAGCACTACATACCCAGACCCATCAAATGACCCGAACTTAAGGCTAGGGCAGGCAACGGATGATAGTCTTGTTACTGCAACAGGAAGCACGACACCAAGACGCTTAGATGATCGCTTTGCTGATGTTGTTAATCTTCTTGATTTTGGCGCTGTTGGTGATGGGGTTACAGATGATTCAGCAGCAATTCAACTAGCTTTAAACTCTCTAACTGAGGGGCAAAAATTAATATCACCATCAAGAACATACCGGTGCTCAAGTGAAATATCTAGGTCTTTCGGTCGCGGCAGTGACAGAGTGATAATTGAGTTAAATGGTGTATTTGTATTTGAATCAAGCAATGGATTTCATTTCAAGGATGTATTTGATGCGGATATACGACTTGGCGTAGTTGCCTATCTAACAGATTCAATTGATGATGCAAATGCTTCCGCTGGTACTGGAGTTACAATAACCTCATTGTGGACATCAAGGGTTGAGATAATTAAAACTGTGAACTTTGCGACCGGAACAAAGTTAGTTGGAGGCGATTTAAACCCTGTATCTGGAAACGGTATGGCATTCTGTGATGTTATAGTAAGGAATGCTTCTTCACCTGTGGTTGGTGGCATTGGTATTGAGGTTACAACCATACCGAGCGGAACTAATCCTGGCTACTTTAATGGTAACTCAATTTATGCAGGGTTCATGCGTGGTGAGACTGGACTTAAATTCACGAAAGGCTCACTGCAATCAGACCCATTTAACGGCAACTTTATTGACAGACCTCAAATTGAATTGTGCTCCGAGGTTGGTATTGATATGGAGTTTTGCACGTCAAGCACTATATCGTGGCCAAGGTTTGAAGGTTCTGGCGAGCCTAATCAGTATTGGATTTTAGAGAGAGAAGACTCATCACGGAATGATTTTTACACCACAGGTGCGGTTGTTGAATCAAAGATATTGCTTGGCGGTATACTTTCAAACAGATTTGGTCGCATGAACTCGATAGGCGGTGGCCTTGTGGCCGATATGAGATTCGGTGGTGCTGACAACTCAGACGTGACTGGGGATGCTAATGAGCTTTATATTGCCAGAACAAGAGGAGCAAACACGCCAAATAACACGGTTTATTTTGGTGGAATCATTGGTGAGTATGGTGGTGGACGATGGAATAAATTTGCTGGTGGAGTGAAAGACAGGGATGGAAATGAAAAGGTATTTGGATTGCTTGACCCTATCGGTCAATTTACGGCAATTGGAGCTAGTGGTCTAACTGAAGTTCCAAGAGGCATATCCTACATTGAGCTTTCAACAACCGGAGCGTCTGATGTCAACCTAATAATGCCAGCCGATAGAGAAATTAACGGCTACACACAAATGCATCTAAATATAACATTTTTCACAAATCAAATTGAGATATCAAAGTCTAGTGGCACGGTGGTGATTAATTCCGGAGTAATATCAGAGGCAGGATTATATCTATTAGTTTACAGATCAGATACATGGAAAGTTCAGAAAATTGGGGATAAGTTACTTCCATAG

Genome Context

Genome Context

Tertiary structure

PDB ID
88d433373f7c536e630ba6a18eb1b5b805316c2fcf28187a351bf9a3e7b53126
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,7234
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
A major lineage of nontailed dsDNA viruses as unrecognized killers of marine bacteria Kauffman,K.M., Hussain,F.A., Yang,J., Arevalo,P., Brown,J.M., Chang,W.K., VanInsberghe,D., Elsherbini,J., Cutler,M.B., Kelly,L. and Polz,M.F. 2018-01-24 — GenBank