Protein

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Genbank accession
QIG67485.1 [GenBank]
Protein name
hypothetical protein
RBP type
TSP
Evidence RBPdetect
Probability 0,68
Protein sequence
MPLNLARKLGLGLGTFKQDGGSVTPVQPTVFPFDPVTSMFASDCAMGPWYALSTTPPIMKMSDGKVWAGYQGFDWTNGLGLENKVKVYSAGAWGTEYPALLCDSSTDNHGGGAWVETPGPYMHMFGGTHNGPMRHASTATPGDPSTMTRRADIGNLYTYPHPVADAAGMIHLFVRKAINAETRMPLMLIKSTAMASGVPTWGAEKELINFGTDTRYYQGGMVETGTEVHMLATKADFADTVRRNVYYVIYDKTTGTLYNHDKSFSVNAASQPVNLATMNANFRIFDQEGAGTFGQIPSLAIDAAGTKHIAFLDGSGGTRAVKVMSIVAGVIGTPVTVDTVSSNQSSVCLRTMDDGVRLELAYTKENAFTYPGGGGDIWRAERFSNGTWSDLVKIAAATKMYAFGSITPVYKGDDNLSFAFGEVVGTSTTDVENGYILRAYMYGQSAGFKPRASAYHADATAYFAAMTTQETTDVKNRIDAFIKTLVEVKKWDKFEVVHFGALATQQAALIDMTGRHVLSANGSPAFVAGVGFDPDGVDDYINFGFNPSSTSGLRITQTTLSVMAFILDEGQETNALMGTLSATTPSVSLVPRNTSDTATTRLNDGTSLNGANTTAVGFMLAVRNGSTKTLFKNRTQIATASTAATGTVNGNAILFGSGTGRSNKRAPFAAWGTQSFSALSTPAVVNAVVRLLLESGVISADIPD
Physico‐chemical
properties
protein length:704 AA
molecular weight: 74835,45970 Da
isoelectric point:6,08577
aromaticity:0,09517
hydropathy:-0,08679

Domains

Domains [InterPro]
DC_0727
STR
30–704
DC_0727
PF15892
STR
107–313
PF15892
QIG67485.1
1 704
Architecture
STR
STR 30-704
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
QIG67485.1
1 704
Domain Start End Length (AA) Confidence
N-terminal 1 526 526 0,0557
Central domain 527 693 168 0,3623
C-terminal 694 704 10 0,9413
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-526
Central
527-693
C-terminal
694-704

Taxonomy

  Name Taxonomy ID Lineage
Phage Rhizobium phage RHph_TM3_14A
[NCBI] 		2509560 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host No host information

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
QIG67485.1 [NCBI]
Genbank nucleotide accession
MN988472 [NCBI]
CDS location
range 12735 -> 14849
strand -
CDS
ATGCCATTGAACCTCGCTAGAAAGCTGGGGCTTGGCCTTGGCACCTTTAAACAGGATGGCGGTTCTGTCACGCCTGTGCAGCCTACTGTTTTTCCATTTGATCCAGTCACTTCAATGTTTGCTTCAGACTGTGCGATGGGTCCATGGTACGCACTGTCCACCACACCACCAATTATGAAGATGAGCGATGGCAAGGTGTGGGCCGGATATCAGGGCTTTGATTGGACGAACGGCCTCGGTCTGGAGAACAAGGTCAAGGTTTATTCAGCAGGCGCTTGGGGTACGGAATATCCAGCGCTGCTTTGTGATAGCTCGACCGACAACCATGGCGGCGGCGCTTGGGTGGAGACACCCGGTCCATACATGCACATGTTTGGTGGAACGCACAATGGGCCTATGCGCCACGCTTCTACGGCCACCCCCGGTGATCCCTCCACCATGACACGCCGGGCTGATATTGGTAACCTGTATACCTACCCTCATCCGGTAGCTGATGCGGCGGGTATGATCCATCTTTTTGTGCGCAAGGCAATTAATGCCGAGACACGCATGCCATTAATGCTAATCAAAAGCACGGCGATGGCTTCAGGTGTTCCGACATGGGGTGCCGAGAAAGAACTTATAAATTTTGGAACTGACACCCGCTATTATCAGGGCGGGATGGTTGAGACCGGCACAGAAGTTCATATGCTGGCAACCAAGGCAGACTTTGCCGACACCGTGCGGCGAAACGTCTACTATGTTATTTATGACAAGACGACGGGTACGCTCTACAACCATGATAAGTCGTTCTCGGTCAACGCTGCATCACAGCCTGTAAATCTTGCCACAATGAATGCAAACTTCCGCATATTTGACCAAGAAGGTGCGGGTACGTTTGGGCAGATACCATCCCTAGCTATCGATGCTGCTGGAACCAAGCACATTGCTTTTCTCGATGGTTCTGGGGGTACGCGGGCTGTAAAGGTCATGTCTATTGTGGCTGGTGTTATTGGTACGCCAGTTACGGTAGATACCGTCTCCAGCAACCAGTCGTCTGTATGCCTGCGAACTATGGATGACGGGGTACGACTAGAATTAGCGTATACCAAGGAGAATGCATTTACCTATCCGGGTGGTGGGGGTGATATATGGCGTGCTGAAAGGTTCTCCAATGGCACATGGAGTGACCTTGTCAAAATTGCAGCTGCTACAAAAATGTATGCGTTCGGCAGCATCACGCCTGTTTACAAGGGCGATGATAATCTATCATTTGCCTTTGGGGAGGTTGTTGGCACGTCCACCACGGACGTGGAGAATGGATATATTCTGCGTGCATACATGTATGGCCAGTCTGCCGGTTTCAAACCACGCGCTTCCGCTTATCATGCCGATGCCACGGCCTATTTCGCGGCGATGACGACACAAGAGACGACGGACGTCAAGAACCGCATCGATGCCTTCATCAAGACACTGGTGGAGGTCAAGAAGTGGGATAAATTTGAAGTCGTGCACTTTGGCGCTCTTGCTACACAGCAGGCAGCGCTTATTGACATGACCGGGCGTCATGTGCTTTCTGCTAATGGTAGCCCTGCATTTGTGGCGGGGGTTGGCTTCGACCCGGATGGCGTGGACGACTACATCAACTTTGGGTTCAACCCTTCATCTACAAGTGGCCTTCGAATAACCCAAACCACCTTGTCGGTCATGGCTTTCATTCTTGATGAAGGACAGGAAACGAATGCCCTGATGGGCACGTTGTCTGCGACCACTCCATCAGTCAGCCTCGTGCCGCGAAACACGAGCGACACAGCTACCACACGACTTAATGACGGCACCAGTTTGAATGGGGCCAACACAACGGCAGTTGGTTTTATGCTCGCCGTGCGCAATGGCTCTACCAAGACGCTGTTCAAGAACAGGACACAGATTGCTACTGCATCAACAGCGGCTACCGGCACTGTTAACGGAAATGCTATCCTATTTGGTTCCGGTACGGGCCGGTCAAACAAGCGTGCTCCATTCGCGGCTTGGGGCACGCAGTCATTCTCGGCGCTATCGACACCAGCTGTGGTGAACGCGGTTGTTCGACTTCTTCTGGAGAGTGGAGTTATTTCCGCTGATATCCCCGATTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
cb2d504972de22973da2a62ceebb770fd2945b7a9f49e67d850b55ed6e82129b
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,7876
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Patterns of diversity and host range of bacteriophage communities associated with bean-nodulatin bacteria Vann Cauwenberghe,J., Santamaria,R.I., Bustos,P., Juarez,S. and Gonzalez,V. 1998-01 — GenBank