Protein

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Genbank accession
WBF05219.1 [GenBank]
Protein name
tail fiber protein 4
RBP type
TF
Evidence GenBank
Probability 1,00
TSP
Evidence DepoScope
Probability 1,00
TF
Evidence RBPdetect
Probability 0,90
TF
Evidence RBPdetect2
Probability 0,87
Protein sequence
MALRLSNNGVGFLAAALAANGDTIALQPGQGEAFPVLAAGDWCPCTLVNAAGHVEIVRVTARSDDTFTVLRAQEGTAAIACAAGDRFEHRMTAGTLTAMFNALTAAITQIRPRVGDIKVWRGAVADIASVHGPGWQLADGSNGTTDLRDRFLVGAGSSYAPGATGGATTVTLAANHMPVHNHAVTDPGHTHTVSDPGHAHSVYDPGHAHNTYSNYYNLGAQGSGTVTPYNGNGQVVSGGAVLTGYTGIAIYGAATGIAIAARATGITTQNAGSGAAHENRPPYYALAFIEYTGIGVVDPLAS
Physico‐chemical
properties
protein length:302 AA
molecular weight: 30703,75070 Da
isoelectric point:6,06935
aromaticity:0,06954
hydropathy:0,04967

Domains

Domains [InterPro]
DC_0891
STR
1–298
DC_0891
cd22641
STR
63–292
cd22641
SSF88874
STR
114–289
SSF88874
WBF05219.1
1 302
Architecture
STR
STR 1-298 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
WBF05219.1
1 302
Domain Start End Length (AA) Confidence
N-terminal 1 193 193 0,7316
Central domain 194 291 99 0,0067
C-terminal 292 302 10 0,9905
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-193
Central
194-291
C-terminal
292-302

Taxonomy

  Name Taxonomy ID Lineage
Phage Burkholderia phage CSP3
[NCBI] 		3017166 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Burkholderia contaminans
[NCBI] 		488447 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Betaproteobacteria > Burkholderiales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
WBF05219.1 [NCBI]
Genbank nucleotide accession
OQ053201.1 [NCBI]
CDS location
range 20934 -> 21842
strand +
CDS
ATGGCGCTCAGGCTCTCGAACAACGGCGTCGGGTTTCTGGCTGCCGCGCTGGCCGCCAACGGCGATACGATCGCGCTTCAGCCTGGACAAGGCGAGGCGTTCCCGGTCCTTGCCGCCGGCGATTGGTGCCCCTGCACGCTCGTCAATGCGGCCGGGCACGTCGAGATCGTGCGCGTCACGGCGCGCTCTGACGACACGTTCACGGTGCTGCGCGCGCAGGAAGGCACCGCGGCGATCGCGTGCGCGGCCGGCGACCGCTTCGAGCACCGCATGACCGCGGGCACGCTCACGGCGATGTTCAACGCCCTGACGGCAGCGATCACGCAGATTCGGCCGCGCGTGGGCGACATCAAGGTTTGGCGGGGCGCCGTCGCGGACATCGCGTCGGTTCACGGGCCCGGATGGCAGCTCGCGGACGGCTCGAACGGCACGACCGACCTGCGCGATCGGTTTCTCGTCGGTGCCGGCAGCTCGTATGCGCCGGGCGCCACGGGCGGCGCCACCACGGTCACGCTCGCCGCAAACCATATGCCGGTCCACAATCACGCCGTCACCGATCCGGGCCATACCCACACCGTGAGCGACCCCGGCCATGCGCACTCGGTCTATGACCCCGGCCACGCCCACAACACGTACTCGAACTACTACAACCTCGGCGCTCAGGGCAGCGGAACCGTGACGCCGTACAACGGCAACGGTCAGGTCGTATCCGGCGGCGCCGTCCTCACGGGCTACACCGGCATCGCAATCTATGGTGCCGCAACCGGCATTGCGATCGCGGCCCGCGCGACGGGCATCACCACGCAGAACGCGGGCAGCGGGGCGGCGCACGAGAACCGGCCGCCGTACTATGCGCTGGCGTTCATCGAGTACACCGGGATCGGCGTGGTCGACCCTCTGGCATCTTGA

Genome Context

Genome Context

Tertiary structure

PDB ID
bd69b03a3b447b2452643ccdd47c00e303c4b520208fde7214187ec79377545e
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,8170
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Burkholderia contaminans bacteriophage CSP3 requires O-antigen polysaccharide for infection Stanton,C., Batinovic,S. and Petrovski,S. 2023-06-15 — GenBank