Protein

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Genbank accession
UCR81183.1 [GenBank]
Protein name
tail connector protein
RBP type
TSP
Evidence RBPdetect
Probability 0,89
Protein sequence
MADLKLGSTAGGSVLWHQGNFPLTPVSNDLLYKTYKVYTEYNKPQAADNDFVSKANGGNYKNNVYFEKGLTFNDTNGYGIKLGTRTGGAPFTASFRIKGAFGYETENGTPFIIFDPNTAVGAKRLTVMGDSLFRQVYDESGRVFSPGNTPTKAQVGLPLVDNAKQVQINNTNMQTMTGVLAAPNFISLNPASDAGHVPRFDQIVIKDSIQDFGYY
Physico‐chemical
properties
protein length:215 AA
molecular weight: 23406,91770 Da
isoelectric point:7,82919
aromaticity:0,12093
hydropathy:-0,36186

Domains

Domains [InterPro]

No domain annotations available.

Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
UCR81183.1
1 215
Domain Start End Length (AA) Confidence
N-terminal 1 32 32 0,9682
Central domain 33 204 173 0,1305
C-terminal 205 215 10 0,5004
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-32
Central
33-204
C-terminal
205-215

Taxonomy

  Name Taxonomy ID Lineage
Phage Escherichia phage PSD2002
[NCBI] 		2880953 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Escherichia coli
[NCBI] 		562 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Enterobacterales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
UCR81183.1 [NCBI]
Genbank nucleotide accession
OK335775 [NCBI]
CDS location
range 36424 -> 37071
strand -
CDS
ATGGCAGATTTAAAATTAGGTTCTACAGCAGGAGGTTCAGTATTATGGCACCAAGGTAATTTTCCCTTAACGCCTGTATCAAATGACCTTCTTTACAAAACATATAAAGTTTATACCGAATATAATAAACCACAAGCCGCTGATAACGACTTTGTTTCAAAAGCAAACGGCGGCAATTATAAGAATAACGTGTATTTTGAAAAAGGGCTGACCTTTAATGATACTAATGGATACGGTATTAAATTAGGAACAAGAACTGGTGGAGCACCGTTCACGGCTTCTTTCCGTATTAAAGGCGCTTTTGGATATGAAACGGAAAACGGTACTCCATTTATAATATTTGACCCGAATACAGCAGTTGGTGCTAAACGACTTACCGTAATGGGTGATTCATTATTCCGTCAGGTATACGATGAATCTGGCCGCGTATTCAGCCCAGGCAACACCCCTACTAAAGCCCAAGTCGGATTGCCATTAGTAGATAACGCAAAACAAGTCCAAATAAATAATACTAACATGCAAACAATGACCGGAGTACTTGCTGCTCCTAACTTTATTTCGCTGAATCCGGCCTCTGACGCAGGACACGTTCCTCGTTTTGACCAGATTGTTATTAAAGATTCTATTCAAGATTTTGGTTATTATTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
17e51c7ece42e563e0f9dd0a95a2f7d23f22dd08ea9c88845ee4c9f15ae1f03e
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,5925
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Phages are superior to antibiotics on the recovery when treating E. coli O157:H7 infections Wang,Y., Subedi,D. and Tang,F. 2024-01 — GenBank