Protein

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Genbank accession
YAO55080.1 [GenBank]
Protein name
base plate tail tube protein
RBP type
TSP
Evidence RBPdetect
Probability 0,89
Protein sequence
MFYSLMRESKIVIEYDGRGYHFDALSNYDASTSFQEFKTLRRTIHNRTNYADSIINAQDPSSISLAINFSTTLIESNFFDWMGFTREGNSLFLPRNTPNIEPIMFNMYIINPNNSCIYFENCYVSTVDFSLDKSIPILNVGIESGKFSEVSTFRDGYTITQGEVLPYSPPAVYTNSAPLPALVSASMSFQQQCSWREDRSIFDINKVYTNKRAYVNEMNASATLAFYYVKRLVGDKFLNLDPETRTPLIIKNKYVSITFPLARISKRLNFSDLYQVEYDVIPTADSDPVEINFFGERK
Physico‐chemical
properties
protein length:298 AA
molecular weight: 34251,25410 Da
isoelectric point:5,23427
aromaticity:0,14094
hydropathy:-0,25839

Domains

Domains [InterPro]
IPR056389
ATT
1–297
IPR056389
YAO55080.1
1 298
Architecture
ATT
ATT 1-297 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
YAO55080.1
1 298
Domain Start End Length (AA) Confidence
N-terminal 1 11 11 0,9112
Central domain 12 210 200 0,0181
C-terminal 211 298 87 0,2052
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-11
Central
12-210
C-terminal
211-298

Taxonomy

  Name Taxonomy ID Lineage
Phage Salmonella phage vB_CECAV_033
[NCBI] 		3456260 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Salmonella typhimurium
[NCBI] 		90371 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Enterobacterales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
YAO55080.1 [NCBI]
Genbank nucleotide accession
PX061015 [NCBI]
CDS location
range 99906 -> 100802
strand -
CDS
ATGTTTTATTCTCTCATGCGAGAGTCTAAAATAGTTATTGAGTATGATGGTAGAGGGTATCATTTCGATGCCCTCTCTAACTATGATGCTAGTACGTCTTTTCAAGAGTTTAAAACTCTTAGACGTACTATCCATAATCGTACAAACTATGCAGACTCTATTATTAATGCTCAAGATCCTTCATCTATTTCATTGGCAATAAATTTCAGTACTACGCTTATTGAGTCTAATTTCTTTGATTGGATGGGATTCACGCGTGAGGGAAATTCTTTATTTTTGCCAAGAAATACTCCCAATATTGAACCTATTATGTTCAATATGTATATTATTAATCCTAATAATAGCTGTATTTATTTCGAAAACTGTTATGTATCAACAGTTGATTTTTCTCTAGATAAGAGTATACCGATCCTAAATGTTGGTATTGAGTCTGGAAAATTCTCTGAAGTATCTACTTTCCGCGATGGATATACAATTACACAAGGTGAAGTACTTCCATATAGTCCTCCAGCTGTGTATACTAATAGCGCACCATTGCCTGCATTAGTTTCAGCATCTATGTCCTTCCAGCAACAATGTTCTTGGAGAGAAGATAGAAGTATATTTGATATAAATAAAGTTTATACTAATAAACGAGCTTATGTCAATGAAATGAATGCTTCCGCAACGCTAGCTTTCTATTACGTTAAGAGATTGGTAGGAGATAAGTTCTTGAATCTAGACCCTGAAACAAGAACTCCACTAATTATTAAGAATAAATATGTTTCTATAACATTCCCTTTAGCACGTATTTCAAAACGCCTAAACTTCTCAGATTTGTATCAGGTAGAGTATGATGTAATACCTACTGCTGATTCAGATCCTGTAGAAATAAACTTCTTTGGAGAAAGAAAATAA

Genome Context

Genome Context

Tertiary structure

PDB ID
acecac955175c146f7b7ac6c324fdac6e72e4532f3013b645808b070f821fd68
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,7849
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50