Protein

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Genbank accession
QDF45946.1 [GenBank]
Protein name
hypothetical protein
RBP type
TF
Evidence UniProt/TrEMBL
Probability 1,00
TSP
Evidence RBPdetect
Probability 0,88
Protein sequence
MDTGVAEFCPVLTQLTEPAKYTTEWDLQNPHHIVNDKNRSGKREGMSVMIGDYIYVATGSEPTDVWIRMPRQERATFGAGSTETMQADATSGLVRPTAIRGLATQGKIVGFDVQSDKVRNVSGRTLENCSGTFTIDIDKVNDGLGTSQLYIWSQISDDGITWEAQPYSLRHVEVASSSESTYTYTSFVRDWRDKQYVRLVFAVKSGSSIRVRAISELVGSDVIHGYGFLWEMEED
Physico‐chemical
properties
protein length:235 AA
molecular weight: 26210,91260 Da
isoelectric point:4,98941
aromaticity:0,09362
hydropathy:-0,39106

Domains

Domains [InterPro]

No domain annotations available.

Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
QDF45946.1
1 235
Domain Start End Length (AA) Confidence
N-terminal 1 20 20 0,9346
Central domain 21 219 200 0,0104
C-terminal 220 235 15 0,9973
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-20
Central
21-219
C-terminal
220-235

Taxonomy

  Name Taxonomy ID Lineage
Phage Vibrio phage vB_VpaP_MGD2
[NCBI] 		2565877 Uroviricota > Caudoviricetes > Autographivirales > Colwellvirinae > Kaohsiungvirus
Host Vibrio parahaemolyticus
[NCBI] 		670 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Vibrionales

Coding sequence (CDS)

Coding sequence (CDS)

No CDS data available.

Genome Context

Genome Context

Tertiary structure

PDB ID
32f295eeaa036d7dfdef5095ac0868ea0ecbe4adbd02f9711f8c826739a3b77a
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,4714
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50