Protein

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UniProt accession
A0A8S5SMB1 [UniProt]
Protein name
Stabilization protein
RBP type
TSP
Evidence DepoScope
Probability 1,00
Protein sequence
MGERFFASTNGFRLGLDWSKPAESIDLQSLTQAINCEYSPTDGALQTVPGVKIIYTGTANIESLYYDNYRHQYYFSCNHDLYKTADFVTVTRLGTLTGNSTPKYHAFDHDILIASGGKLQAVSGTGVLSTVDESPTCEFVSSHSGSVIVASIYGHRITWSAVGDYKSWTTNTNDASSAQYVEVGYKDPGCIVSIDFLSKAIIVYKEYGRAYQVVGNPHEKTLAVYPLSETALCCGSSISIDDRSYYLGDAGLMSFVPTNTYANIQPFEVGLNINAQLMTITSEQARMWHVPGRKQLWIKPGRNQDIFIYHYLPRYEDGRGVFTSRSFVHNLHDVLTVSKDVYIAYGNKIGILDSSIDTDDGEQITTSIVSGNRLAQRLFLLLFSYNFVSSNRIEGYGSITISDKRAKPVTFKAAGTKLYYANEKLINATGRLNSNEYTKVNKIGGGANRHLQIKIFVAKGAIALRQFDYTYEEV
Physico‐chemical
properties
protein length:474 AA
molecular weight: 52625,52210 Da
isoelectric point:6,63791
aromaticity:0,11814
hydropathy:-0,21097

Domains

Domains [InterPro]

No domain annotations available.

Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
A0A8S5SMB1
1 474
Domain Start End Length (AA) Confidence
N-terminal 1 99 99 0,7605
Central domain 100 298 200 0,0114
C-terminal 299 474 175 0,6434
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-99
Central
100-298
C-terminal
299-474

Taxonomy

  Name Taxonomy ID Lineage
Phage Podoviridae sp. ctHMt20
[NCBI] 		2827728 Uroviricota > Caudoviricetes >
Host No host information

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
DAF51799.1 [NCBI]
Genbank nucleotide accession
BK032622 [NCBI]
CDS location
range 13486 -> 14910
strand -
CDS
ATGGGAGAACGTTTCTTTGCTTCGACGAACGGTTTTAGGTTAGGTTTGGACTGGAGCAAGCCGGCAGAAAGTATTGATTTGCAGAGTTTGACGCAGGCAATAAACTGCGAATACAGCCCGACGGACGGCGCGCTTCAAACAGTGCCGGGCGTGAAAATAATTTATACGGGAACGGCGAATATTGAAAGTTTGTATTATGACAATTACCGCCATCAGTATTACTTTTCATGTAACCATGATTTGTATAAAACAGCTGATTTTGTGACGGTCACCCGGCTGGGAACATTAACCGGTAACAGCACTCCGAAATACCACGCTTTTGACCATGATATATTGATTGCGTCCGGCGGTAAGCTGCAGGCTGTTTCTGGTACTGGCGTATTGTCTACTGTGGACGAAAGTCCGACTTGCGAATTTGTGAGCAGCCATTCTGGATCTGTCATAGTAGCGTCAATCTATGGACACCGTATCACATGGTCAGCTGTCGGAGATTATAAATCATGGACAACGAACACGAACGACGCGTCATCGGCGCAATATGTAGAAGTTGGTTATAAAGATCCCGGCTGTATTGTATCTATTGATTTCTTGTCAAAGGCAATCATTGTATATAAAGAATACGGTAGGGCATATCAAGTTGTGGGTAATCCCCACGAGAAGACACTTGCTGTTTATCCTCTTTCTGAAACGGCTTTGTGCTGCGGCAGTTCTATCAGCATTGATGACCGAAGTTATTATTTGGGTGATGCGGGGCTGATGAGTTTTGTTCCGACAAATACGTATGCGAATATTCAGCCGTTCGAAGTGGGTCTTAATATTAATGCACAACTGATGACGATTACCTCAGAGCAAGCCCGGATGTGGCATGTTCCTGGAAGAAAACAGCTGTGGATTAAACCCGGGAGAAATCAGGATATATTTATTTATCATTATCTGCCGCGGTACGAGGACGGACGCGGTGTATTCACGTCAAGGTCTTTCGTTCATAATCTGCATGATGTGTTGACAGTCAGCAAGGATGTCTATATTGCCTATGGTAATAAAATAGGCATTCTTGATTCAAGTATAGATACTGATGACGGAGAACAGATTACGACGTCGATTGTTTCAGGGAACAGATTGGCGCAAAGACTGTTCTTACTGCTATTCTCTTATAATTTCGTATCAAGCAACCGTATCGAAGGTTATGGCAGTATTACGATTAGCGATAAACGGGCAAAACCTGTTACATTCAAAGCGGCCGGTACAAAGTTATACTATGCGAATGAAAAGTTGATTAACGCAACCGGCAGGCTGAATAGCAATGAGTATACGAAAGTAAATAAGATCGGCGGCGGAGCGAACCGCCATCTGCAGATAAAAATATTTGTTGCCAAGGGCGCTATCGCTTTGCGGCAGTTTGATTATACTTACGAGGAGGTTTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
4e2526de6a8e548f9b871a8ba9cbb3ab678f01323c92e053782fcb70a0d137b5
ColabFold
Source ColabFold
Method ColabFold
Resolution 0,8890
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50