Protein

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Genbank accession
YP_009147633.1 [GenBank]
Protein name
EPS depolymerase
RBP type
TSP
Evidence DepoScope
Probability 1,00
TSP
Evidence RBPdetect
Probability 0,91
TSP
Evidence RBPdetect2
Probability 0,94
Protein sequence
MATNSTNTDYRRSGNFWAGGVVTDEYSIIQDEDGNWYRYVGVRPKPFNVTPGVRPNNENWVSVGPLVSGGSNSIQGESFKAGGTVDNIKEFVIDEATGLWYFWTGDYPKVIPANSTPETTGGVKDGAWKLLNGTGSGGGDADLSTVLKINNNLTDLQDKPASLKTLGGKPKAHVDGLANFNALRSLVPDEEGQRVYIRCHTAPALTTFLPEGDGWFVARKGTMADDGGFIAQVNSTWYWERDKPIEELYIGDFGAPADGITDAQPAFQRYINFLFGDYARLRTNGTKSGNSVGGGYSPYLTLRYGAGTYYQTPGVYNKFGNKAYTATELALNPSGYTAAGGMRIEGATTSFGRLICTKIISDKSDNPVFLINHRRFAVRNIIWDGQQTTQRNAYNKDTNPTGTNLAVGATSLADQPNFLTNKQPFLTNECPGGCYMKLENLQFNNIGGHGIYVLDTLDSKVNEVFSSNTAAPWLKTGWSDPQAQYQGSWDHSTSIEITNINCSSPMGPALWLPRVGQGLMRNVWFEHGYVPFDINNGQWDMDMVCIEDCTKNATAWNCKFTVRTLSVPTGNGIDTDSPTSGKWNSYTTNPDGTTISAWSEGYGQGSYLLMNNGAYFDCVVQPKYTRGVLRGENNTDNTLWINVGSFSSPTNGSTFKIRIVGNPYYNTAGNQNMLTDRLAGETIIYVGRGTAATPKISFHNINGGVCTSAPQYKPQTFNTVIPEIWVPIRARTAEFSIFVESTGLTRRESGVPAQFTPSGVTTNTSPNLTAIPGRFSYNTNKAGFGANEDVVEITSRLTAGANGGTSTPATDAQLGSEPVHPNVVRWMRMAVGGQELAVPVYAWKPVFTTNNPATLSVAVGGTLTLSPVVTDAISQQWQYSSDNGTTWSNITTSGTAQTYTKANVQTTDSGQYRLAVRANNGSGGNGVTTFGPVTTVTVA
Physico‐chemical
properties
protein length:939 AA
molecular weight: 101513,39320 Da
isoelectric point:5,79203
aromaticity:0,10543
hydropathy:-0,39787

Domains

Domains [InterPro]
G3DSA:2.10.10.80
ATT
10–75
G3DSA:2.10.10.80 G3DSA:2.10.10.80 DC_0685 IPR036179
G3DSA:2.10.10.80
ATT
10–80
G3DSA:2.10.10.80 DC_0018 DC_0716 DC_2066
IPR040775
RBD
71–130
IPR040775 IPR003599
YP_009147633.1
1 939
Architecture
ATT
STR
ATT 10-237 | STR 245-939
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
YP_009147633.1
1 939
Domain Start End Length (AA) Confidence
N-terminal 1 262 262 0,9951
Central domain 263 657 396 0,9813
C-terminal 658 939 281 0,8352
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-262
Central
263-657
C-terminal
658-939

Taxonomy

  Name Taxonomy ID Lineage
Phage Erwinia phage phiEa2809
[NCBI] 		1564096 Uroviricota > Caudoviricetes > Pantevenvirales > Nezavisimistyvirus > Nezavisimistyvirus Ea2809
Host Erwinia amylovora
[NCBI] 		552 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Enterobacterales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
YP_009147633.1 [NCBI]
Genbank nucleotide accession
NC_027340 [NCBI]
CDS location
range 130908 -> 133727
strand -
CDS
ATGGCAACGAATTCAACCAATACCGATTACCGCCGCTCAGGTAACTTCTGGGCCGGTGGTGTCGTTACTGACGAATACAGCATCATTCAAGATGAGGACGGCAACTGGTATCGCTATGTTGGTGTCCGCCCAAAACCTTTCAACGTCACTCCAGGCGTTCGACCAAACAATGAAAACTGGGTAAGCGTAGGCCCGCTGGTTTCAGGCGGTTCCAACAGCATCCAGGGTGAATCCTTCAAAGCTGGCGGCACAGTCGATAACATCAAAGAGTTCGTTATTGACGAGGCTACTGGCCTGTGGTACTTCTGGACCGGTGATTATCCAAAAGTGATCCCAGCTAACTCTACTCCTGAAACAACTGGGGGTGTTAAAGATGGTGCCTGGAAGCTCCTGAACGGCACAGGTAGCGGCGGCGGTGATGCTGACCTTTCCACCGTTCTGAAAATTAACAACAACCTGACTGACCTTCAGGATAAACCTGCTTCCCTGAAAACACTGGGCGGTAAGCCGAAGGCTCACGTTGACGGTCTGGCCAATTTTAACGCCTTGCGATCACTGGTTCCTGACGAAGAAGGTCAGCGTGTTTATATTCGTTGCCATACAGCGCCTGCTTTGACAACTTTCCTCCCTGAAGGTGATGGTTGGTTCGTTGCTCGCAAAGGGACCATGGCCGACGATGGCGGTTTCATTGCTCAGGTGAACAGCACCTGGTATTGGGAACGAGATAAGCCAATTGAAGAATTGTATATTGGTGACTTCGGTGCGCCTGCTGATGGCATAACCGATGCTCAGCCTGCATTCCAGCGTTACATTAATTTCCTGTTTGGTGACTATGCGCGTCTTCGGACCAATGGTACTAAAAGTGGTAATTCGGTCGGCGGTGGGTATTCCCCATATCTGACACTTCGCTATGGTGCTGGTACTTACTATCAAACGCCTGGCGTTTACAATAAATTTGGAAACAAAGCATACACTGCGACCGAACTTGCGCTGAATCCATCAGGCTACACTGCGGCAGGCGGTATGCGTATCGAAGGTGCGACTACGAGTTTTGGTCGTCTGATTTGTACCAAGATTATTTCAGACAAGTCAGATAATCCGGTCTTCCTGATCAACCATCGCCGCTTTGCAGTTCGAAACATTATTTGGGATGGTCAACAGACAACCCAACGTAATGCGTACAACAAAGATACGAATCCAACAGGAACGAACCTGGCAGTGGGTGCAACCTCACTTGCCGACCAGCCCAATTTCCTGACCAACAAACAGCCGTTCCTGACCAATGAATGTCCGGGTGGTTGTTATATGAAACTCGAAAACCTCCAGTTTAACAATATTGGTGGCCATGGCATTTACGTTCTGGATACTCTTGATTCTAAAGTCAATGAAGTGTTCAGCTCTAACACTGCTGCTCCATGGCTGAAAACTGGTTGGTCAGATCCACAGGCTCAGTATCAGGGCTCATGGGACCACAGTACTTCTATCGAGATTACGAACATTAACTGTTCCAGTCCGATGGGACCTGCTTTGTGGTTACCACGTGTTGGCCAGGGTTTGATGCGTAACGTCTGGTTTGAGCACGGTTATGTTCCTTTCGACATTAACAACGGTCAGTGGGATATGGACATGGTCTGTATCGAAGACTGTACCAAGAACGCAACAGCGTGGAACTGTAAATTCACTGTCCGTACCCTGTCTGTTCCAACGGGTAACGGCATTGATACAGATTCACCGACCAGCGGTAAATGGAATTCATACACCACTAACCCGGATGGCACTACAATCAGCGCGTGGTCTGAAGGTTATGGCCAGGGTTCTTACTTGCTGATGAACAACGGTGCCTACTTCGATTGCGTCGTGCAGCCGAAATATACACGTGGTGTTCTGCGCGGTGAGAACAATACAGATAACACCCTGTGGATCAACGTTGGTTCCTTCTCAAGCCCAACGAATGGCAGTACATTCAAAATCCGTATCGTGGGCAACCCGTACTATAACACAGCGGGCAACCAGAACATGCTGACCGACCGTCTGGCGGGTGAGACAATCATCTATGTGGGCCGTGGTACTGCTGCGACGCCGAAGATCAGCTTCCACAACATTAACGGTGGTGTTTGTACTTCAGCTCCTCAGTATAAGCCACAGACGTTCAACACTGTGATCCCTGAGATCTGGGTGCCTATCCGGGCGCGCACAGCTGAGTTCTCTATCTTTGTTGAATCGACTGGCCTGACTCGTCGTGAATCTGGTGTACCTGCTCAGTTTACTCCGAGCGGCGTGACTACAAACACCTCACCAAACCTGACAGCAATTCCAGGTCGCTTCAGCTACAACACCAACAAAGCAGGTTTTGGTGCTAACGAAGATGTGGTTGAGATCACTTCACGACTGACTGCAGGCGCAAATGGCGGTACTTCCACCCCTGCAACTGATGCCCAGCTTGGTAGTGAGCCAGTTCATCCAAACGTAGTTCGTTGGATGCGTATGGCAGTTGGTGGTCAGGAACTTGCGGTGCCGGTATACGCGTGGAAGCCAGTGTTCACGACCAACAACCCGGCTACACTGAGTGTTGCTGTAGGCGGTACGCTGACGCTGTCTCCGGTTGTTACCGACGCGATCTCCCAGCAGTGGCAGTATTCTTCTGACAACGGCACCACCTGGTCGAACATCACCACATCCGGTACTGCTCAGACTTATACCAAAGCGAATGTGCAGACAACCGACTCTGGGCAGTACCGTCTTGCAGTCCGCGCCAACAACGGCTCAGGCGGTAACGGTGTCACAACGTTCGGTCCTGTTACCACAGTTACAGTTGCGTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
bd661bd8c25bad0acbe81d2569742e83439c865d0c77be08217b2d521fef6df4
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,5895
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Characterization of a new ViI-like Erwinia amylovora bacteriophage Lagonenko,A.L. and Valentovich,L.N. — — GenBank