Protein

View in Explore

Genbank accession

WNA15944.1 [GenBank]

Protein name

tail fiber protein

RBP type

Evidence Phold

Probability 1,00

Evidence RBPdetect2

Probability 0,95

Protein sequence

MHSIKTDVSIQGTTTVQQDMKVQGNAVIDNNITATGDASFTNATFTKVDVGQDISASTIAISGNINVDGDLIGSDNTEATFNKVNTEDISTTKISTTDLTSTGTISSDHIINSNKINTKDLVSTVSVTSNKINTTDLVSTGTITSDTMINSNVINTKDLSSTGSISSQTIQTKDLSSTGTITSDTITNTNGIKTKDVVSTGTITSNVTTASEVHAVNLTSTGTINSDTINNNNSIITKDVSSSGVISSNTIESNVINNTNGINTSSLVSTGVITTNSLNSTESIKTKNITSTGMVSASNITTDQAIITKDLHSSGVINSQVINSTRMINAKDVISTGTLTTKDIQSDTITTTGSITTGNIVSSGTITTAEINVNTINSTDLVISGNIMTVGESSTDAVNTNFLTLGDTLNAAFINNVTWVNTTNGMSLSPVLQKLSNDGTVAGLPMSKIYSEMDNLEVNGSVGPNTVDFEGKYDTSSNSAVFSITAVPAEDYTGEIRILVANEATDTSLIDYKVPNVSMTSGESYEFQFDCPLWSNETDTMHYQVLDSDGIPVKVLSNNGQKPYISLKYRNFDEYQVLTTNDISVIAESLRNLPQNERLDVLSLNNVDQLMNGTFMGSINFGAGVSQFNNAVRNSYWKAETAGVLDGISFNIGDKIVCTRTTGTVTTINSTDYFSIETNINPLATSTVAGTIIPHNGLNVDSQGKVSVSIGTGLAFDNTFNITADVANIDVTKLKNFNTLQKGSFRGILPNTLTALAGSVRGDFWKANASGKIGSQTYNAGDELFCNTDTPSTPTNLNNFTLIPQATAIMVGSTLTSPGIAGNVPSPKAGDNNKAFFGDGTYKSVITPLDVVDTIGSTSGVLPLSANQGTLLNDLIATKASTSDIVDNLSDNSANKPLSANQGRILAGLIANKSNSDDIVDNLNSTSTSVPLSANQGRVLSSNIQLKLNSTDVVDSLLNTSPSKALSANQGYIIGNLLDQKIGTSSIVDNLTSTSGSSVLSANQGYILSSMVGTKLNISDVVDNLIDVSTNKALSAHQGNVLNGLISTKVSTSDIVDNLLSSNSTVPLSAKQGKILQASINTKINTADIVDSLTSTSTVAPLSANQGSVINTALSNKVNISDVTDNLTSISISAPLSANQGRILNNQVQAKLNVSDIIDSVTLTTTNQALSANQGKVLNDKIGTKINTADIVDSLTSTSIIFPLSARQGTVLNTLIGTKVNTSDIIDSLTSTNPNKPLSANQGAVISVILSNKVNISDIVDNLTTVSSSRPLSANQGVILSSQIDTKQSTLISGTNIKSINGTSLLGSGNIVTNVPATTTTSGNITLSGDLSGTATAPVVSRINGISVSGSPVAGHILIANGTNTAIWQPQTAMYNANSTTSGLMSAADKSKLDTFSGTFTGSTSSAAGSIGLVPAPSIADSHNHMLKANGTWGGVNNAARVSCYNTVNKASLLAFGPMTANSAMTVTGNTSLYTGNTTGVSVAVAGLYKVTCTAMITAGLINGGHQFGVGLGAGTSISGAAYRIDALSVNTISNVSFCEIVSVAAGQNICCSYMSSSILNTYQGFTMVVEKLD

Physico‐chemical properties

protein length:	1574 AA
molecular weight:	163126,29550 Da
isoelectric point:	4,69350
aromaticity:	0,03748
hydropathy:	-0,02560

Domains

Domains [InterPro]

DC_0964
STR
806–885

DC_0964 IPR054500 IPR054500 DC_0964 IPR054500 IPR054500 IPR054500 IPR054500 IPR054500 IPR054500 IPR054500 IPR054500

IPR054500
STR
863–884

IPR054500 DC_0964 IPR054500 DC_0964 DC_0964 DC_0964 DC_0964

DC_0964
STR
877–919

DC_0964 DC_0964 DC_1936 DC_0964 DC_0964

WNA15944.1

1 1574

Architecture

STR

STR 806-1533 |

Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Domains [InterPro]

Domain ID	Category	Cluster	Start	End	Layer	Name	Pref Zone	Confidence	Evidence	Support
DC_0964	STR	DC_0964	806	885	Novel HMM	DC_0964	Central	Low	Positional only	36 proteins / 36 hits
IPR054500	STR	DC_0514	863	884	InterPro cluster	Phage tail fiber repeat	C-terminal	Medium	Text match	81 proteins / 83 hits
DC_0964	STR	DC_0964	877	919	Novel HMM	DC_0964	Central	Low	Positional only	36 proteins / 36 hits
IPR054500	STR	DC_0514	885	916	InterPro cluster	Phage tail fiber repeat	C-terminal	Medium	Text match	81 proteins / 83 hits
DC_0964	STR	DC_0964	908	952	Novel HMM	DC_0964	Central	Low	Positional only	36 proteins / 36 hits
IPR054500	STR	DC_0514	919	952	InterPro cluster	Phage tail fiber repeat	C-terminal	Medium	Text match	81 proteins / 83 hits
DC_0964	STR	DC_0964	945	987	Novel HMM	DC_0964	Central	Low	Positional only	36 proteins / 36 hits
DC_0964	STR	DC_0964	982	1020	Novel HMM	DC_0964	Central	Low	Positional only	36 proteins / 36 hits
IPR054500	STR	DC_0514	987	1020	InterPro cluster	Phage tail fiber repeat	C-terminal	Medium	Text match	81 proteins / 83 hits
DC_1936	STR	DC_1936	1014	1054	Novel HMM	DC_1936	Central	Low	Positional only	19 proteins / 19 hits
IPR054500	STR	DC_0514	1021	1054	InterPro cluster	Phage tail fiber repeat	C-terminal	Medium	Text match	81 proteins / 83 hits
DC_0964	STR	DC_0964	1045	1089	Novel HMM	DC_0964	Central	Low	Positional only	36 proteins / 36 hits
IPR054500	STR	DC_0514	1055	1087	InterPro cluster	Phage tail fiber repeat	C-terminal	Medium	Text match	81 proteins / 83 hits
IPR054500	STR	DC_0514	1089	1122	InterPro cluster	Phage tail fiber repeat	C-terminal	Medium	Text match	81 proteins / 83 hits
DC_0964	STR	DC_0964	1109	1157	Novel HMM	DC_0964	Central	Low	Positional only	36 proteins / 36 hits
IPR054500	STR	DC_0514	1123	1156	InterPro cluster	Phage tail fiber repeat	C-terminal	Medium	Text match	81 proteins / 83 hits
DC_0964	STR	DC_0964	1150	1192	Novel HMM	DC_0964	Central	Low	Positional only	36 proteins / 36 hits
IPR054500	STR	DC_0514	1157	1189	InterPro cluster	Phage tail fiber repeat	C-terminal	Medium	Text match	81 proteins / 83 hits
DC_0964	STR	DC_0964	1187	1226	Novel HMM	DC_0964	Central	Low	Positional only	36 proteins / 36 hits
IPR054500	STR	DC_0514	1191	1224	InterPro cluster	Phage tail fiber repeat	C-terminal	Medium	Text match	81 proteins / 83 hits
DC_0964	STR	DC_0964	1218	1249	Novel HMM	DC_0964	Central	Low	Positional only	36 proteins / 36 hits
IPR054500	STR	DC_0514	1225	1258	InterPro cluster	Phage tail fiber repeat	C-terminal	Medium	Text match	81 proteins / 83 hits
DC_0964	STR	DC_0964	1244	1533	Novel HMM	DC_0964	Central	Low	Positional only	36 proteins / 36 hits
IPR054500	STR	DC_0514	1259	1289	InterPro cluster	Phage tail fiber repeat	C-terminal	Medium	Text match	81 proteins / 83 hits

Taxonomy

	Name	Taxonomy ID	Lineage
Phage	Xanthomonas phage XaC1 [NCBI]	3073039	Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host	Xanthomonas vesicatoria [NCBI]	56460	cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Lysobacterales

Coding sequence (CDS)

Genbank protein accession

WNA15944.1 [NCBI]

Genbank nucleotide accession

OR258281.1 [NCBI]

CDS location

range 168262 -> 172986
strand -

CDS

ATGCATTCTATAAAAACTGATGTAAGCATTCAAGGAACAACCACTGTACAACAGGATATGAAAGTACAGGGTAATGCGGTGATAGATAATAACATCACTGCTACTGGTGATGCAAGTTTTACCAATGCAACATTTACTAAGGTTGACGTGGGGCAGGATATTTCTGCCTCCACTATAGCAATATCTGGTAATATAAATGTTGATGGTGACTTGATTGGTTCAGATAACACTGAGGCCACATTCAATAAAGTAAATACGGAAGATATTAGTACTACAAAAATAAGTACCACTGATTTAACGAGTACAGGTACAATATCCTCTGACCATATTATAAATTCTAATAAAATTAACACTAAAGACTTAGTAAGTACTGTTAGTGTCACTTCAAATAAAATTAACACTACGGATTTAGTCAGTACAGGAACTATTACCTCCGATACAATGATTAATTCTAATGTGATTAACACCAAGGATTTATCTAGTACAGGTTCAATATCTTCACAAACCATTCAGACGAAGGATCTATCTAGTACAGGTACGATTACTTCTGACACTATAACAAATACGAATGGAATTAAAACAAAAGATGTTGTAAGTACTGGTACAATTACATCAAATGTTACCACAGCTAGTGAAGTTCACGCAGTGAACCTTACAAGTACAGGTACTATCAATTCTGATACCATTAATAATAACAACAGTATTATTACAAAGGATGTTAGTAGTTCTGGAGTCATAAGCTCTAATACTATTGAGTCTAATGTTATTAACAACACCAATGGCATCAATACTTCTAGTCTAGTAAGCACTGGAGTAATAACCACAAATTCCTTAAACAGTACAGAAAGTATCAAAACTAAAAATATTACAAGCACAGGAATGGTGAGTGCTTCTAATATTACAACAGACCAAGCCATTATAACTAAGGATCTTCACAGTTCTGGCGTTATTAATAGTCAGGTCATAAACAGTACAAGAATGATCAACGCAAAAGACGTCATCAGTACTGGAACTTTAACAACCAAAGACATACAATCAGATACTATTACAACTACCGGTTCAATTACTACCGGGAATATTGTTAGTTCTGGCACAATTACAACTGCTGAAATAAATGTCAATACTATAAACAGTACTGACCTTGTTATAAGTGGTAATATCATGACTGTTGGTGAATCTAGCACTGATGCAGTCAACACAAATTTCTTAACATTAGGTGATACACTTAATGCTGCATTTATTAATAACGTAACATGGGTCAATACAACTAATGGTATGTCATTGTCTCCTGTTCTTCAAAAACTAAGTAATGATGGTACGGTTGCTGGCTTACCAATGTCAAAGATTTATTCTGAAATGGATAATCTTGAAGTAAATGGCTCAGTTGGACCAAATACTGTAGATTTTGAAGGAAAATATGATACATCAAGTAATTCAGCAGTATTTTCTATTACAGCGGTTCCCGCCGAAGATTATACCGGTGAAATACGAATTTTAGTAGCAAATGAAGCGACTGATACATCATTAATTGACTACAAAGTACCTAATGTTTCTATGACTTCTGGCGAATCATATGAATTTCAGTTTGATTGCCCATTATGGAGCAATGAGACCGATACGATGCACTATCAAGTACTAGATTCAGATGGCATTCCAGTAAAAGTACTTAGTAATAATGGTCAGAAACCGTATATTTCACTAAAATATAGAAATTTTGACGAATATCAAGTGCTTACTACAAATGATATTTCTGTTATTGCTGAATCTTTACGTAATTTACCTCAAAATGAACGTTTAGATGTGCTTTCGCTTAATAACGTAGACCAATTAATGAATGGTACATTCATGGGTTCTATTAATTTTGGTGCAGGTGTATCACAATTTAATAATGCAGTAAGAAATTCATACTGGAAAGCAGAAACTGCTGGTGTACTTGATGGGATTAGCTTTAATATTGGTGATAAAATAGTTTGTACTAGGACTACCGGTACAGTCACAACCATTAATTCAACTGATTACTTTAGTATTGAAACAAATATAAATCCACTAGCCACGTCAACTGTTGCTGGTACTATTATACCACACAATGGTTTAAATGTTGACTCACAAGGTAAAGTTTCAGTAAGTATTGGTACTGGTTTAGCATTTGATAACACATTTAATATTACTGCTGATGTTGCAAATATTGATGTTACTAAGCTTAAAAACTTCAATACTCTACAGAAAGGTTCTTTCAGAGGCATTCTGCCGAATACACTAACCGCATTAGCTGGTTCAGTTCGCGGTGACTTTTGGAAAGCAAATGCTTCTGGTAAAATTGGTAGTCAGACTTATAATGCAGGTGATGAACTATTTTGTAATACTGATACCCCAAGTACCCCAACTAATCTTAATAATTTTACGCTAATACCACAAGCTACTGCTATTATGGTAGGAAGTACTTTAACTTCACCGGGGATTGCAGGAAACGTACCTTCTCCTAAAGCTGGTGATAACAACAAAGCATTCTTTGGTGACGGAACATACAAATCTGTAATTACTCCACTTGATGTTGTTGATACAATTGGCAGTACTTCAGGGGTTTTACCACTAAGTGCAAATCAGGGTACTTTACTTAATGATTTGATTGCAACTAAAGCAAGCACATCTGATATTGTGGATAACTTATCTGATAATAGTGCAAACAAACCTTTAAGTGCAAATCAGGGTCGTATTTTAGCTGGACTAATTGCTAATAAGTCTAATTCTGATGATATAGTTGATAATCTTAATAGTACAAGCACATCTGTGCCATTAAGTGCCAATCAAGGTAGAGTATTAAGCTCTAATATTCAGTTAAAACTTAATAGTACTGATGTTGTTGATAGCTTATTGAATACTTCACCATCAAAAGCTCTTAGTGCTAATCAAGGTTACATAATCGGCAATTTACTTGATCAGAAGATCGGAACAAGTAGTATTGTTGATAATCTTACCAGTACATCGGGATCTTCGGTTCTAAGTGCAAATCAGGGATATATCTTAAGCTCAATGGTAGGAACTAAGCTTAATATTTCTGATGTTGTAGATAACCTTATTGATGTAAGTACAAATAAAGCATTGAGTGCACATCAGGGTAACGTTCTAAACGGTTTAATTAGCACTAAAGTTAGTACTTCAGATATTGTTGATAACCTGTTAAGCTCAAATTCAACGGTTCCACTAAGTGCTAAACAAGGTAAAATACTTCAAGCTTCAATTAATACAAAGATTAACACTGCTGATATTGTTGATTCTTTAACAAGTACCAGTACTGTTGCTCCTTTGAGTGCTAATCAGGGTAGTGTTATTAATACTGCGTTAAGTAACAAAGTTAATATATCGGATGTTACTGATAACCTGACAAGTATATCAATTAGTGCTCCACTTAGTGCAAATCAAGGTAGGATTCTTAACAATCAAGTACAAGCTAAGCTGAATGTAAGTGATATTATTGATAGTGTAACACTTACAACTACCAATCAGGCACTCAGTGCAAATCAAGGTAAAGTTCTTAATGATAAAATCGGTACTAAGATTAATACTGCTGATATTGTTGATTCATTAACAAGTACCAGTATTATCTTCCCTCTTAGTGCTAGACAAGGTACGGTTCTTAATACATTAATTGGAACAAAAGTTAATACTTCAGATATTATTGATAGTTTAACCAGTACAAACCCAAATAAGCCATTGAGTGCTAATCAGGGTGCGGTTATTAGTGTAATTTTGTCTAATAAAGTTAATATTTCAGATATTGTTGATAATTTAACTACCGTTTCAAGTTCAAGACCATTAAGTGCCAATCAAGGTGTTATATTAAGTTCTCAGATTGATACTAAGCAAAGTACTTTGATATCTGGTACTAATATAAAAAGCATCAATGGTACAAGTTTACTAGGTTCAGGTAATATTGTAACTAACGTTCCAGCCACCACAACCACATCAGGTAACATTACTTTATCTGGAGATCTAAGTGGTACTGCAACCGCTCCAGTAGTGTCTAGAATCAACGGTATAAGCGTCAGTGGTTCACCAGTAGCAGGACATATCCTTATAGCTAACGGCACTAATACTGCAATCTGGCAACCACAGACTGCTATGTATAATGCTAATAGCACTACATCTGGTTTGATGAGTGCAGCAGATAAATCTAAACTTGATACATTCAGTGGAACCTTTACTGGAAGTACTTCAAGTGCAGCAGGGTCAATTGGCTTAGTACCTGCACCATCTATTGCTGACAGTCACAACCATATGCTTAAGGCTAATGGTACTTGGGGTGGTGTGAATAACGCTGCTCGTGTAAGCTGTTATAATACTGTAAACAAAGCATCATTACTTGCATTTGGTCCAATGACCGCTAACTCTGCAATGACAGTAACCGGTAATACCTCGTTATATACTGGTAATACAACTGGAGTCAGTGTTGCAGTTGCTGGATTATATAAAGTAACTTGTACTGCGATGATAACTGCCGGTTTGATTAACGGTGGTCATCAGTTTGGTGTAGGTTTAGGTGCAGGAACTTCAATAAGTGGTGCAGCATACCGCATCGATGCATTATCTGTCAATACAATTAGTAACGTTTCTTTTTGCGAAATTGTAAGTGTTGCCGCAGGACAAAACATATGCTGTTCATATATGTCTAGTTCAATACTCAATACTTATCAAGGTTTTACAATGGTTGTAGAAAAATTAGATTAA

Genome Context

Tertiary structure

PDB ID

120edea6dcc963496fdf458bc6a5f8f3f10ec35f76892335af343ba585f1a7fd

ColabFold

Source ColabFold

Method ColabFold

Resolution 0,3726

Oligomeric State monomer

Download PDB

Model Confidence

Very high
pLDDT > 90

High
90 > pLDDT > 70

Low
70 > pLDDT > 50

Very low
pLDDT < 50

Literature

Title	Authors	Date	PMID	Source
Isolation and characterization of two novel jumbo bacteriophages infecting Xanthomonas vesicatoria isolated from agricultural regions in Mexico	Rubi,L.M., Villicana,M.C., Amarillas,L.A., Carrillo,A. and Leon,J.	2014-03-01	—	GenBank

Protein

Domains

Domains [InterPro]

Domains [InterPro]

Taxonomy

Coding sequence (CDS)

Coding sequence (CDS)

Genome Context

Genome Context

Tertiary structure

Predicted Aligned Error (PAE)

Model Confidence

Literature