Protein

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Genbank accession
YP_009324191.1 [GenBank]
Protein name
short tail fiber protein
RBP type
TF
Evidence GenBank
Probability 1,00
TF
Evidence Phold
Probability 1,00
TF
Evidence RBPdetect
Probability 0,88
Protein sequence
MKSARIGTIMPWSGDGNTGFALSNIPQGWIVCDGKLQDAARYPLLVAQIGDTYGADAAFGGDFPEYTGKFRVPNMTLQMPIDLEPTHLAQTAYQYGQTDAYDVLVTNSYTGDPLVDGFGSISLNSPIPITINANTDIDFTVDASISMSGKFTNISIAPPDFSATVYTINRKLGINHTPGHSHPGTYSRATAQFAGPQPFEPTGITTGGGISGNCVTDFGYSECQLTAPDTAPSWQQGRNTITYYGDEQHEFTLPQTDRFYLFSGSASWGQVPAQSWPPSGQHPSGIQKADNLQYQFNGSAYTATFDVSDPVKTHAQDAWTGIFPKPMEVANRRNHFGPVVNYDPDTSAPWNVAGVTIEPTASSIDLPAGADIGDAYELDQVVPFMWVYLDNVLAPGTQIVAISRGGSSDANYVYTLELSQPTINSAQLTNQTLEFRHGTYPTTTNNITSQLDPNSSSFLGHNHGSFEIIQGQGSLAAPTVFAINDISLGTVAPEDINDALNIIAEVSMPALVVTFLIKAF
Physico‐chemical
properties
protein length:520 AA
molecular weight: 55817,10880 Da
isoelectric point:4,40186
aromaticity:0,10385
hydropathy:-0,21077

Domains

Domains [InterPro]
IPR037053
ATT
1–75
IPR037053 DC_0344
SSF88874
STR
3–71
SSF88874
IPR011083
ATT
7–70
IPR011083
YP_009324191.1
1 520
Architecture
ATT
STR
ATT 1-75 | STR 76-520
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Taxonomy

  Name Taxonomy ID Lineage
Phage Synechococcus phage S-WAM2
[NCBI] 		1815522 Uroviricota > Caudoviricetes > Pantevenvirales > Cymopoleiavirus > Cymopoleiavirus swam2
Host Synechococcus sp.
[NCBI] 		1131 cellular organisms > Bacteria > Bacillati > Cyanobacteriota/Melainabacteria group > Cyanobacteriota > Cyanophyceae

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
YP_009324191.1 [NCBI]
Genbank nucleotide accession
NC_031935.1 [NCBI]
CDS location
range 33312 -> 34874
strand +
CDS
ATGAAGAGTGCCAGAATTGGCACTATCATGCCCTGGTCTGGGGATGGTAATACAGGTTTCGCCCTGTCTAACATCCCCCAAGGTTGGATTGTTTGCGATGGAAAGCTACAGGATGCTGCAAGGTATCCTTTATTAGTAGCACAGATTGGAGATACATACGGTGCTGATGCAGCATTTGGTGGAGATTTTCCAGAATATACTGGAAAATTTCGTGTGCCAAATATGACACTGCAAATGCCTATTGACTTAGAACCAACGCATCTTGCACAGACAGCATATCAGTATGGTCAAACTGACGCATATGATGTGTTGGTAACTAATTCTTATACTGGTGACCCACTGGTAGATGGATTTGGTAGCATTAGTTTGAATTCGCCTATTCCCATCACTATTAATGCAAACACTGATATTGATTTTACGGTGGATGCATCTATATCAATGAGTGGAAAGTTTACAAACATTTCAATTGCTCCACCAGACTTTAGTGCTACTGTCTATACTATCAATAGAAAATTAGGTATTAACCACACTCCTGGTCACTCACACCCAGGAACATATAGTAGAGCAACCGCACAGTTTGCTGGACCACAACCATTCGAACCAACTGGTATTACAACTGGTGGTGGCATTTCTGGTAACTGTGTTACTGACTTTGGATATTCTGAATGTCAATTGACAGCACCAGATACTGCACCATCTTGGCAGCAGGGTAGAAATACTATCACATACTATGGTGATGAACAGCATGAATTTACACTGCCACAGACAGATAGATTTTATCTCTTTAGTGGAAGTGCATCTTGGGGACAAGTCCCTGCACAATCATGGCCACCTTCTGGACAACATCCATCAGGAATTCAAAAAGCAGATAATCTACAATATCAATTTAATGGTAGTGCATATACAGCAACCTTTGATGTTAGTGATCCAGTAAAAACTCACGCTCAGGATGCATGGACTGGTATCTTCCCAAAACCGATGGAAGTTGCTAACAGAAGAAACCACTTTGGACCTGTAGTTAACTATGATCCAGATACATCTGCACCATGGAATGTTGCTGGAGTTACAATTGAACCTACTGCGAGTTCCATTGATTTGCCCGCAGGTGCTGACATTGGTGATGCATATGAACTAGATCAGGTTGTTCCTTTTATGTGGGTATACCTTGATAATGTTCTCGCCCCAGGCACACAGATTGTTGCCATCAGCAGAGGAGGATCGTCAGATGCTAATTATGTTTACACTTTAGAATTATCACAACCAACAATTAACTCTGCTCAACTTACAAATCAAACATTAGAATTTAGACACGGAACATATCCAACAACAACTAATAATATTACTTCACAGTTAGATCCAAATAGTTCTTCTTTCTTAGGTCACAACCATGGCAGTTTTGAAATTATTCAGGGTCAAGGATCTCTCGCTGCTCCAACTGTCTTTGCAATTAATGACATCAGTTTAGGCACAGTTGCTCCTGAAGATATCAATGATGCCCTAAATATTATTGCTGAGGTATCAATGCCAGCACTAGTTGTTACGTTCCTAATCAAAGCATTCTGA

Genome Context

Genome Context

Tertiary structure

PDB ID
b31a230b443158a215f0e07ffd15eb7084c3f98b46b1c8f54ac96492c816d825
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,4202
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50