Protein

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Genbank accession
QBO63492.1 [GenBank]
Protein name
putative tail fiber adhesin
RBP type
TF
Evidence RBPdetect
Probability 0,86
Protein sequence
MAVVGVPGWIGSSAANETGQRWMSQAAGQLRLGVPCWMSQFAGRSREIIHTLGADHNFNGQWFRDRCFEAGSAPIVFNITGNLVSYSKDVPLFFMYGDTPNEYVTLNIHGGVHMWGRGGNGTVNGNPGTNGGDVIQNDIGGRLRIWNYGVIASGGGGGGAVSLQNSWAPNATAGGGGGRPFGIGGGGVNWPGGNASYDAPGGAGYTSQFGGGNGGDAGGRGGDGWGNHLSRSGGGAPGRAVFGSSPSWGATGTIYGSWI
Physico‐chemical
properties
protein length:259 AA
molecular weight: 26241,44550 Da
isoelectric point:7,85484
aromaticity:0,10811
hydropathy:-0,26834

Domains

Domains [InterPro]
IPR048291
ATT
1–42
IPR048291 IPR007932
DC_2135
STR
1–142
DC_2135
QBO63492.1
1 259
Architecture
ATT
STR
RBD
ATT 1-42 | STR 43-142 | RBD 143-259
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Taxonomy

  Name Taxonomy ID Lineage
Phage Escherichia phage vB_EcoM_G2540
[NCBI] 		2502299 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Escherichia coli
[NCBI] 		562 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Enterobacterales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
QBO63492.1 [NCBI]
Genbank nucleotide accession
MK327936 [NCBI]
CDS location
range 159082 -> 159861
strand +
CDS
ATGGCAGTAGTTGGTGTTCCTGGTTGGATTGGAAGTTCAGCCGCAAATGAAACAGGACAGCGCTGGATGAGTCAAGCGGCTGGTCAATTAAGATTGGGTGTTCCTTGCTGGATGAGTCAATTTGCAGGTCGCTCACGAGAAATTATTCACACGCTTGGAGCAGACCATAACTTCAATGGTCAATGGTTCCGAGATAGATGTTTTGAGGCAGGTAGTGCACCTATAGTGTTTAATATCACCGGAAATTTAGTATCATATAGTAAAGATGTTCCTTTATTCTTTATGTACGGCGATACGCCAAATGAATATGTTACTTTGAATATTCATGGTGGAGTTCATATGTGGGGACGAGGTGGTAACGGTACTGTAAACGGAAACCCAGGCACAAATGGCGGCGATGTAATCCAAAATGATATCGGCGGAAGACTTCGTATTTGGAACTATGGCGTTATTGCATCAGGCGGTGGCGGTGGCGGTGCAGTGTCATTACAGAATAGCTGGGCGCCAAATGCTACAGCAGGTGGCGGCGGTGGTAGACCATTTGGCATCGGCGGTGGCGGCGTTAATTGGCCAGGTGGTAATGCTAGTTATGACGCGCCTGGTGGTGCCGGTTACACTTCCCAATTCGGCGGTGGTAATGGTGGCGATGCTGGGGGTCGGGGCGGAGATGGATGGGGTAATCACTTATCTAGATCTGGCGGTGGTGCTCCTGGCAGAGCAGTATTCGGAAGTTCACCGTCATGGGGTGCTACAGGCACAATCTACGGCTCCTGGATTTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
9fec791e7b86588770244a4462884f319de4e003054e559576f78e3f4e4953dd
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,8402
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Still something new to discover - new insights into E. coli phage diversity and taxonomy Korf,I.H.E., Adriaennsens,E., Dreiseikelmann,B., Kropinski,A., Nimtz,M., Meier-Kolthoff,J.P., Rohde,M., van Raaij,M. and Wittmann,J. 2019-05-17 — GenBank