Protein

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Genbank accession
BDU78952.1 [GenBank]
Protein name
peptidase
RBP type
TF
Evidence RBPdetect
Probability 0,87
Protein sequence
MATIKEFAKKKINNDFDLSVSKVASRCYDTGRFQAYGLSNAQVKKVLNAVKANGISPAFFAAYEASEGYNSSWGWLNHTTPQGNYLQDAKSVSRWLKNQSNDMNGKPAWIDYANYKDFVPASVKRKGNKDFKNMPKGSIGRAYIPGTAATTWEVYYPKGLKASYNGVQNYGAPLNDAMKTIEYWGGNIDSSGGSGGDSGGDDGGSGGSGDDGDSDGGSGGGGETITVRPDLSSVNDFFKKFIDDLIKEINKELKKDINLKGLSGNSYASKYLIIQKQLNNTYKPKPGKAFTNMLDKAKEDGSKDLKNLVSKLEKDNTYTKETGGDSGGGDSGGGDSGGGDSGGSDSGKGWYFPYKTDVLTVTSPQGNRWGSYHHGADVVAGSGGNIYAMHSGTVKISSDSVPGWEVSGAMICIQNDKDDGFGGLYVQYEEFKSGSQKVKVGDKVKGGQAIAVSGISGNSTGEHLHFSTNKKGKLVPARRGNWETALDCINLPNKAGKYKLPSGIKKPG
Physico‐chemical
properties
protein length:508 AA
molecular weight: 54038,21150 Da
isoelectric point:9,01366
aromaticity:0,09646
hydropathy:-0,70886

Domains

Domains [InterPro]
DC_1289
STR
1–325
DC_1289 IPR011055
IPR050570
Unmapped
280–475
IPR050570
IPR011055
RBD
347–473
IPR011055
IPR016047
ENZ
372–474
IPR016047
cd12797
ENZ
373–466
cd12797
BDU78952.1
1 508
Architecture
STR
RBD
STR 1-325 | RBD 341-490 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Taxonomy

  Name Taxonomy ID Lineage
Phage Tetragenococcus phage phiYA5_2
[NCBI] 		3003628 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Tetragenococcus halophilus
[NCBI] 		51669 cellular organisms > Bacteria > Bacillati > Bacillota > Bacilli > Lactobacillales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
BDU78952.1 [NCBI]
Genbank nucleotide accession
LC742552 [NCBI]
CDS location
range 13625 -> 15151
strand +
CDS
ATGGCAACAATTAAAGAATTTGCAAAGAAAAAAATTAATAATGATTTTGATCTTTCCGTTAGTAAAGTCGCTTCCCGTTGTTATGATACCGGACGTTTTCAAGCTTATGGGTTAAGTAACGCGCAAGTTAAAAAAGTACTTAATGCGGTAAAAGCAAATGGTATTTCGCCCGCATTTTTTGCTGCCTATGAAGCTAGTGAGGGTTATAACAGCTCTTGGGGGTGGCTCAACCACACCACACCCCAAGGAAATTATTTACAAGACGCAAAAAGTGTTAGCCGTTGGTTAAAAAACCAATCAAACGATATGAACGGAAAACCTGCTTGGATTGATTATGCTAACTATAAAGATTTTGTTCCCGCCAGTGTGAAGCGAAAAGGCAACAAAGATTTTAAAAACATGCCCAAAGGAAGCATAGGAAGGGCTTACATTCCCGGTACAGCGGCAACAACGTGGGAAGTCTATTATCCCAAAGGGCTAAAAGCTTCCTATAACGGCGTACAAAATTACGGCGCGCCTTTAAACGACGCTATGAAAACTATTGAATACTGGGGTGGAAATATCGACAGCTCCGGTGGTTCAGGTGGTGACAGTGGGGGTGACGATGGAGGATCTGGGGGATCAGGAGATGACGGTGATTCTGACGGAGGTTCTGGCGGGGGTGGTGAAACAATCACGGTCAGACCCGATCTATCTTCTGTCAATGATTTTTTTAAGAAATTTATTGATGATCTAATAAAAGAAATCAATAAAGAGCTAAAAAAAGATATCAATCTCAAAGGATTATCCGGAAATTCATACGCCAGTAAATATTTAATTATACAAAAGCAGTTAAATAACACGTACAAACCTAAACCCGGAAAAGCCTTTACGAATATGCTTGACAAAGCCAAAGAAGACGGTTCAAAAGATTTGAAAAATCTTGTCAGCAAGTTAGAAAAAGATAACACCTACACCAAAGAAACCGGAGGGGATTCCGGTGGCGGTGATTCCGGTGGCGGTGATTCCGGAGGAGGTGATTCCGGAGGCAGTGATTCTGGTAAAGGTTGGTATTTCCCTTACAAAACTGACGTTTTAACAGTTACCAGCCCGCAAGGCAACCGTTGGGGAAGTTATCACCACGGGGCTGATGTGGTCGCTGGAAGTGGTGGAAATATTTACGCTATGCATTCAGGAACGGTTAAAATTTCAAGCGATTCCGTTCCCGGGTGGGAAGTTTCAGGGGCAATGATTTGTATCCAAAATGATAAAGACGATGGTTTCGGAGGTCTATATGTACAATATGAAGAATTTAAGAGTGGATCTCAAAAAGTAAAAGTAGGGGATAAAGTGAAAGGCGGTCAAGCAATCGCAGTTTCAGGAATCTCAGGAAATAGCACGGGCGAACACTTGCATTTTTCCACCAATAAAAAAGGCAAATTAGTCCCCGCACGGCGCGGAAATTGGGAAACCGCGCTTGACTGTATCAATTTACCCAATAAAGCAGGGAAATATAAACTACCTTCAGGAATTAAAAAACCCGGATAA

Genome Context

Genome Context

Tertiary structure

PDB ID
6985e938213a8208e17573acc26ec288020d95f20c8a509bcc5477fc20e1c8e1
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,5560
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Identification of capsular polysaccharide synthesis loci determining bacteriophage susceptibility in Tetragenococcus halophilus Wakinaka,T., Matsutani,M., Watanabe,J., Mogi,Y., Tokuoka,M. and Ohnishi,A. — — GenBank