Protein

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UniProt accession
Q859E1 [UniProt]
Protein name
Tail fiber protein
RBP type
TF
Evidence UniProt/TrEMBL
Probability 1,00
TSP
Evidence DepoScope
Probability 1,00
TF
Evidence RBPdetect
Probability 0,90
TF
Evidence RBPdetect2
Probability 0,96
Protein sequence
MATTPKTVRTYALDGTKKDFTIPFEYLARKFVVVTLIGATRRELILNTEYRFTTNTTITTNKAWGPADNFDLIEIRRLTSATERLVDFADGSILRAYDLNISQVQSLHIAEEARDLTADTIGVNNDGDLDARARKIVNLADGVNDGDAVNLRQQKQWAGSALNQAQASAASASQSAQSAANSQASAVNSASSASSAATSATNSASSASNSATQRAASEAAKTASETARDLSQAWASKAEDSVVSGGLYSSYHYSRKSAASAAASQTSATNSASSASFATTEANRATTQADRAKTEADKLGNANTFMGSLQTVDATNKYVRFMPGWSVRMDRIWVDDIYGMNADKVTIRSSTFAVAGAQTNANGITVTSGGLNVTGAATMQSGLTVNGAFQGTSGIFSQPLRAGSVMQVIPQSSNTENTHFWFRDIDASTERALIYADSGRQLHIRANVGSGGEALVRSDNSWSFGNAIEVTRGTRQTIFFNNAAQLDGAMYGNCQLQLQGTGGGIAALGFHNAGRVAGALWLNTDNQLWWMQNSGNNQQMTTNQNVMNHIGGMTADQVGSIASMYNRSGSNLGPDAGVAGSSLRFASHNNVSGTAGSGSWRCLGSGNNGGVCNYVRYV
Physico‐chemical
properties
protein length:618 AA
molecular weight: 65106,71220 Da
isoelectric point:7,72234
aromaticity:0,07120
hydropathy:-0,32492

Domains

Domains [InterPro]
IPR005604
ATT
1–131
IPR005604 Coil
DC_0245
STR
1–614
DC_0245
Q859E1
1 618
Architecture
ATT
STR
ATT 1-131 | STR 132-614 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
Q859E1
1 618
Domain Start End Length (AA) Confidence
N-terminal 1 178 178 0,9856
Central domain 179 396 219 0,7493
C-terminal 397 618 221 0,9231
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-178
Central
179-396
C-terminal
397-618

Taxonomy

  Name Taxonomy ID Lineage
Phage Pseudomonas phage gh-1
[NCBI] 		197783 Uroviricota > Caudoviricetes > Autographivirales > Studiervirinae > Ghunavirus
Host Pseudomonas putida
[NCBI] 		303 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Pseudomonadales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
AAO73174.1 [NCBI]
Genbank nucleotide accession
AF493143 [NCBI]
CDS location
range 31680 -> 33536
strand +
CDS
ATGGCTACTACACCAAAGACGGTGCGGACCTACGCTCTCGACGGCACCAAGAAAGACTTCACGATCCCCTTCGAGTATCTCGCTCGGAAGTTCGTTGTGGTCACCTTGATCGGTGCAACTCGACGTGAGCTGATCCTGAACACCGAGTACCGCTTCACTACCAACACGACCATCACCACGAATAAGGCATGGGGACCGGCTGATAACTTCGACCTGATCGAGATTCGCCGACTGACCTCTGCAACTGAGCGTCTGGTGGACTTCGCTGATGGTTCGATCCTTCGGGCCTACGACCTGAACATCTCTCAGGTTCAATCCCTGCACATCGCTGAGGAAGCCCGTGACTTGACCGCTGACACAATCGGCGTGAACAACGATGGTGACCTTGATGCCCGTGCCCGCAAGATCGTCAACCTCGCTGATGGCGTGAACGACGGTGATGCTGTGAACCTGCGCCAGCAGAAACAATGGGCAGGCTCTGCTTTGAACCAAGCTCAGGCATCGGCTGCCAGTGCGAGTCAATCCGCCCAGTCTGCTGCCAACTCTCAGGCGTCCGCTGTGAACTCTGCAAGTTCCGCTTCGAGTGCTGCCACTTCGGCCACCAACTCGGCGTCTTCAGCGTCCAACAGTGCCACCCAACGAGCTGCGTCTGAAGCCGCTAAGACCGCCTCTGAGACTGCCCGTGACTTGTCCCAAGCGTGGGCCTCGAAGGCTGAGGATAGCGTGGTCTCTGGTGGTCTCTATTCGTCCTACCACTACAGCCGTAAGTCTGCTGCGAGTGCTGCTGCGAGTCAGACCTCTGCGACCAACTCTGCGAGTTCTGCGAGCTTCGCTACGACTGAAGCCAATCGGGCAACCACTCAGGCCGACCGAGCGAAGACTGAGGCCGACAAGCTGGGCAACGCGAACACCTTCATGGGTTCCTTGCAGACTGTTGACGCCACCAATAAGTACGTCCGCTTCATGCCGGGCTGGTCGGTTCGCATGGACAGAATCTGGGTGGACGACATCTACGGAATGAACGCTGATAAGGTGACCATTAGGTCTTCTACGTTCGCTGTTGCTGGTGCCCAGACCAATGCCAACGGAATTACGGTGACTTCTGGTGGCCTAAACGTCACCGGGGCCGCCACCATGCAATCGGGCCTGACAGTCAACGGTGCGTTCCAAGGCACATCTGGGATTTTCTCCCAGCCTCTGCGTGCTGGGTCTGTCATGCAGGTCATCCCTCAGTCGAGTAACACCGAGAACACGCACTTCTGGTTCCGTGACATCGACGCGAGTACCGAACGTGCCTTGATCTATGCGGACTCCGGTCGGCAACTTCACATCCGTGCCAACGTCGGTTCTGGTGGAGAGGCTCTTGTTCGCTCGGATAACTCGTGGTCTTTCGGAAACGCCATTGAGGTAACCAGAGGTACACGTCAGACGATCTTCTTCAACAACGCCGCTCAACTCGATGGTGCAATGTATGGAAACTGCCAGCTCCAGCTACAAGGGACTGGTGGTGGGATTGCAGCACTCGGGTTCCACAACGCTGGCCGGGTTGCTGGTGCGCTCTGGCTGAACACTGACAACCAGTTGTGGTGGATGCAGAACTCTGGCAACAACCAGCAGATGACCACCAACCAGAACGTAATGAACCACATCGGTGGCATGACCGCTGACCAAGTTGGTTCCATCGCTTCCATGTACAACCGGTCTGGTTCCAACCTTGGGCCTGACGCTGGGGTTGCCGGAAGCAGCCTGCGCTTCGCATCGCACAACAACGTGTCTGGTACTGCCGGTTCCGGTTCGTGGCGCTGCCTCGGTTCCGGTAACAACGGCGGGGTCTGCAACTACGTCCGCTACGTATAA

Genome Context

Genome Context

Gene Ontology

Description Category Evidence (source)
GO:0098015 virus tail Cellular Component IEA:UniProtKB-KW (UniProt)
GO:0098671 adhesion receptor-mediated virion attachment to host cell Biological Process IEA:UniProtKB-KW (UniProt)
GO:0046718 symbiont entry into host cell Biological Process IEA:UniProtKB-KW (UniProt)

Tertiary structure

PDB ID
fcd4165585ddf55d1896ba5cd97401bc1a27265377c9d41d83b548b3fcfd8459
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,6565
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
— — 12842620 PubMed