Protein

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Genbank accession
AID17695.1 [GenBank]
Protein name
putative tail tubular protein B
RBP type
TSP
Evidence DepoScope
Probability 1,00
Protein sequence
MAYVTTSYGRPIQGVSQQPDRIRLEGQCTLQENYIPDVVKGLTKRPSTYLVGKIADHGISAFSKFHSYDRGDESYFMCIEPMTNTVKVFNSDGEPQVVNGTTAYVEISEPWKQLDMRTIGDFTFITNKTVPVMMSSEKSPSQSTLGIVYCQYATYGKTYKIMADGAVIATYTTKDGGSASDITDVATDNVALKLYKQIHGDPTASPVIPANPTYDAELHDNVIYVTKRDGGDFKLTTSDSQKGEDLIAAKGSVKSVNQLPPIAPNGFVLRITGEGKSTKDDYWLKAEVSNESKIRWVESVQPNIPISFDATTMPHVLIRESISGGVATFTLKPADWDKREVGGEDSNPIPSFIDEDNPIPIQATGVFQNRLFFLSGEAWIASRSNLFFNFWRESTQAEVDTDPLDGYADTDRVNNLYQYQILNGSLAIFADQAQFIIDGSKPVTKANLTLQQVTAYPNNIHAQPQAGGENIFFAYDASGFTGIRELFTDNYTDTKKAYPITDYVSKYIEGQCTQLLASSNFNSMMVRTEMNPSVVYVYDWLWQAEQKVQSAWHKWVFDGDVLFLFYLSDLMYIVYSKDNKTYVDYLHMVNDPSDYGLDYSIKLDHKVSVTAVYDHALKKYSIQLPYSRGDVVLTVGNGGYETMLGSAFVATHEGSGVWSTTERISDEKDLTVVCGVKYKSRYIPTQPVVKDARDRVIGLDSIIMSNMYVHYELSGFLEMLVKPKQGQERVYRFFGRWMGSANNLVGSPILENGTYRAPIRQRAEDLQITIQSDSHYPLTIRDIEIDGTFHQRGQRI
Physico‐chemical
properties
protein length:796 AA
molecular weight: 89262,28580 Da
isoelectric point:5,17510
aromaticity:0,11181
hydropathy:-0,34724

Domains

Domains [InterPro]
IPR058003
TTP
1–796
IPR058003
AID17695.1
1 796
Architecture
TTP
TTP 1-796
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
AID17695.1
1 796
Domain Start End Length (AA) Confidence
N-terminal 1 138 138 0,9917
Central domain 139 337 200 0,1612
C-terminal 338 796 458 0,1749
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-138
Central
139-337
C-terminal
338-796

Taxonomy

  Name Taxonomy ID Lineage
Phage Escherichia phage ECBP5
[NCBI] 		1498172 Uroviricota > Caudoviricetes > Autographivirales > Gajwadongvirus ECBP5 >
Host Escherichia coli
[NCBI] 		562 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Enterobacterales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
AID17695.1 [NCBI]
Genbank nucleotide accession
KJ749827 [NCBI]
CDS location
range 25902 -> 28292
strand +
CDS
ATGGCCTATGTAACTACCAGCTATGGCAGGCCTATTCAAGGTGTGTCACAGCAACCTGACAGGATTAGGCTAGAGGGGCAATGCACCCTACAAGAGAACTACATACCTGACGTGGTTAAGGGTCTTACTAAGAGGCCATCAACCTATCTTGTAGGCAAGATAGCTGACCACGGCATTAGTGCTTTCTCTAAATTCCACTCATATGATAGAGGTGACGAATCCTACTTCATGTGCATAGAACCTATGACTAACACAGTCAAGGTATTTAACTCTGACGGCGAGCCTCAGGTTGTAAATGGCACTACTGCTTATGTAGAGATCTCAGAGCCTTGGAAGCAGTTGGATATGCGTACCATAGGTGACTTCACATTCATCACTAACAAGACAGTTCCTGTTATGATGTCAAGTGAGAAATCCCCATCTCAGTCAACACTTGGTATTGTCTACTGTCAGTATGCTACCTATGGTAAGACTTACAAGATAATGGCCGATGGAGCTGTAATTGCTACCTACACCACTAAAGATGGTGGCTCTGCATCTGATATTACAGATGTGGCAACTGATAACGTAGCATTGAAACTTTATAAGCAAATTCATGGCGACCCAACAGCAAGTCCTGTTATCCCTGCTAACCCTACATATGACGCTGAGTTACACGACAACGTTATCTATGTGACTAAGAGGGATGGTGGTGACTTCAAACTTACCACTAGTGACTCACAGAAGGGTGAAGACCTAATAGCTGCTAAGGGTTCTGTAAAATCTGTTAACCAGCTACCACCTATTGCACCGAATGGTTTCGTACTCAGAATCACTGGTGAAGGAAAGTCAACTAAAGATGACTACTGGCTAAAAGCGGAAGTTAGTAACGAATCAAAGATAAGGTGGGTTGAATCAGTACAGCCAAATATCCCAATATCTTTCGATGCCACAACTATGCCACATGTGCTTATTCGTGAGTCGATAAGTGGCGGTGTTGCTACATTTACACTGAAGCCAGCTGATTGGGATAAGAGGGAAGTAGGTGGTGAGGATAGTAATCCAATCCCAAGCTTTATTGATGAGGATAATCCAATACCTATTCAGGCTACAGGGGTCTTCCAGAACAGGTTGTTCTTTTTATCTGGTGAAGCTTGGATAGCATCAAGGTCTAACCTTTTCTTTAACTTCTGGAGAGAGTCTACTCAGGCTGAGGTCGACACTGACCCACTTGATGGTTACGCAGACACTGACAGAGTAAACAACCTATACCAGTATCAGATACTCAATGGTTCACTAGCCATATTTGCTGACCAAGCTCAGTTTATAATTGACGGCTCCAAGCCAGTTACTAAAGCTAACCTTACCTTGCAGCAGGTCACTGCTTACCCAAACAACATACATGCTCAGCCACAAGCTGGTGGAGAGAATATCTTCTTTGCTTATGATGCTAGTGGGTTTACTGGTATCCGCGAGTTGTTCACTGATAACTACACAGACACTAAGAAAGCCTACCCAATCACTGACTATGTTAGTAAGTATATAGAGGGTCAATGCACACAGCTGCTAGCTTCCTCTAACTTCAACTCTATGATGGTCAGGACAGAGATGAATCCATCTGTTGTATATGTTTATGATTGGCTATGGCAAGCGGAGCAGAAGGTACAGAGTGCGTGGCATAAGTGGGTGTTTGATGGGGATGTCTTGTTCTTATTCTACCTGTCAGATTTAATGTACATTGTATACAGTAAGGATAATAAAACTTATGTGGACTACTTACATATGGTTAATGACCCGTCGGATTATGGTCTTGATTATTCCATTAAGCTAGATCACAAGGTTTCCGTAACTGCTGTATACGATCACGCGCTGAAGAAGTACTCTATACAGCTGCCTTACAGCAGGGGTGATGTTGTACTTACAGTTGGTAATGGTGGGTATGAAACCATGCTTGGCTCAGCATTTGTTGCTACTCATGAGGGTAGTGGTGTTTGGTCAACTACTGAAAGAATCTCTGATGAGAAAGACCTTACAGTAGTTTGTGGAGTTAAGTACAAATCTAGGTACATACCTACGCAGCCTGTTGTTAAGGATGCCCGTGACAGGGTGATAGGTCTTGATAGTATCATCATGAGCAACATGTATGTTCATTATGAGCTTTCTGGATTCTTGGAGATGTTAGTAAAACCTAAGCAGGGGCAAGAGCGTGTGTACAGATTCTTTGGTAGGTGGATGGGTTCTGCTAATAACTTAGTAGGCTCGCCAATATTAGAGAACGGCACATACAGAGCGCCAATTAGGCAGAGGGCAGAAGATCTTCAGATTACTATACAGTCTGATAGTCACTACCCATTAACCATTCGTGACATAGAAATTGACGGTACATTCCATCAACGTGGACAACGTATATAA

Genome Context

Genome Context

Tertiary structure

PDB ID
eaa56faa8533e3d992ffba858a3bff6d00fd6416b68434cf216ae1169f5ab8de
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,8986
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Complete Genomic and Lysis-Cassette Characterization of the Novel Phage, KBNP1315, which Infects Avian Pathogenic Escherichia coli (APEC) Lee,J.S., Jang,H.B., Kim,K.S., Kim,T.H., Im,S.P., Kim,S.W., Lazarte,J.M., Kim,J.S. and Jung,T.S. 2015 26555076 GenBank
Complete genome sequence of Escherichia coli phage ECBP5 Lee,J.S., Jang,H.B., Kim,K.S., Kim,T.H., Park,S.B., Nho,S.W., Yu,J.E., Yu,J.E., Im,S.P., Kim,S.W. and Jung,T.S. 2015-04-30 — GenBank