Protein

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Genbank accession
QGZ18022.1 [GenBank]
Protein name
hypothetical protein
RBP type
TF
Evidence RBPdetect2
Probability 0,92
Protein sequence
MAIIKVKNPAIDLDAAEIPNLDTSKITSGTLADARFPATLPAASAANLTNIPAANITGTLPAISGENLTGLTSSLSSLTDTTVSSSDPTNTSNKTPVGHLWINSTSGESYVLTDATTNQNDWQNIGEGSGNIKYFPGLTSLVMIGGGGGGAGDMRGGGGAGGVLYFQGYRGTIQYGVQYTITVGNGGADQSGQNDGNDGNNTTAFGETAGGGRGGGPSGTFGDSGSATTSTSNTLYTSFTGYSNTGGDNTGNPGAGGAGAGANGQTLPSGNGDGGNGGVGIQLTNVYNGSDSYYWAGGGGGAGYGNEYDGGDGGLGGGGGGGVFKQDGAGTGGSGGGSALNNGTAGTNQNNSTNGGDAGANTGGGGGNSSHIGGGQSSSASGAGGSGIVMIKTPDSYATATTTGSPVFTNTGGYKYYAFTSSGTITFNQ
Physico‐chemical
properties
protein length:429 AA
molecular weight: 41118,04070 Da
isoelectric point:4,18008
aromaticity:0,06993
hydropathy:-0,39604

Domains

Domains [InterPro]
DC_0946
STR
46–155
DC_0946
IPR049304
STR
140–357
IPR049304
QGZ18022.1
1 429
Architecture
STR
STR 46-357 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Taxonomy

  Name Taxonomy ID Lineage
Phage Pelagibacter phage HTVC104P
[NCBI] 		2686459 No lineage information
Host Candidatus Pelagibacter sp. HTCC7211
[NCBI] 		439493 Pseudomonadota > Alphaproteobacteria > Candidatus Pelagibacterales > Candidatus Pelagibacteraceae > Candidatus Pelagibacter >

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
QGZ18022.1 [NCBI]
Genbank nucleotide accession
MN698243 [NCBI]
CDS location
range 35011 -> 36300
strand -
CDS
ATGGCAATAATAAAAGTTAAAAACCCAGCAATAGATTTAGATGCAGCAGAAATTCCTAATCTTGATACAAGTAAAATTACAAGTGGAACTTTAGCAGATGCTAGATTTCCTGCTACTTTACCAGCAGCTAGTGCAGCTAATTTAACAAATATTCCTGCTGCTAATATTACTGGTACTCTTCCAGCTATTAGTGGAGAAAACTTAACAGGATTAACATCTTCTCTATCTTCTTTAACAGATACAACTGTTTCATCTTCTGACCCAACAAATACATCTAACAAAACTCCAGTTGGACATCTTTGGATAAATAGCACATCTGGTGAATCTTATGTTTTAACTGATGCAACTACAAATCAAAACGATTGGCAAAACATTGGAGAAGGAAGTGGAAATATAAAATATTTTCCAGGTCTTACATCATTAGTCATGATTGGTGGTGGCGGAGGTGGAGCTGGAGATATGAGAGGCGGAGGTGGAGCTGGTGGTGTTCTTTACTTCCAAGGTTATAGAGGAACTATTCAATATGGTGTACAATACACTATTACAGTAGGTAATGGTGGTGCAGACCAAAGCGGTCAAAATGATGGTAATGATGGAAACAACACAACAGCATTTGGCGAAACTGCAGGTGGTGGTAGAGGTGGTGGACCTAGTGGTACTTTTGGTGATTCTGGTTCAGCAACTACTTCAACAAGCAATACTTTATACACTTCATTTACAGGTTACTCAAATACTGGTGGAGACAATACAGGAAATCCTGGAGCTGGAGGTGCTGGAGCTGGTGCTAATGGTCAAACTCTTCCATCTGGAAATGGAGATGGTGGAAATGGTGGTGTAGGTATTCAACTGACAAATGTTTACAATGGTTCAGATAGTTACTATTGGGCAGGTGGCGGTGGCGGTGCTGGTTATGGTAATGAATATGATGGTGGTGATGGCGGTCTCGGTGGAGGCGGAGGCGGTGGTGTCTTCAAACAAGATGGTGCAGGTACTGGAGGTTCTGGAGGTGGCTCTGCTTTAAATAATGGTACTGCAGGAACTAATCAAAATAATTCTACAAATGGTGGAGATGCTGGAGCTAATACTGGTGGCGGTGGCGGTAATTCTTCTCACATTGGCGGTGGACAATCAAGTTCAGCTAGTGGAGCAGGTGGTTCTGGAATAGTTATGATTAAAACACCAGACTCTTATGCAACAGCAACAACTACAGGAAGTCCAGTTTTTACAAATACAGGAGGATATAAATATTATGCGTTCACAAGTTCAGGAACGATAACATTTAATCAATAA

Genome Context

Genome Context

Tertiary structure

PDB ID
724183239b447037ce428f127fea83687be8b4369d1711f6bea9aff8d532c3ee
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,7059
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Novel pelagiphages prevail in the ocean Zhang,Z., Qin,F., Chen,F., Chu,X., Luo,H., Zhang,R., Du,S., Tian,Z. and Zhao,Y. 2019 — GenBank